| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_0028 |
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| Symbol | |
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| ID | 7382719 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax ebreus TPSY |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011992 |
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| Strand | + |
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| Start bp | 31185 |
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| End bp | 33839 |
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| Gene Length | 2655 bp |
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| Protein Length | 884 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 643653346 |
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| Product | PAS/PAC sensor hybrid histidine kinase |
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| Protein accession | YP_002551517 |
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| Protein GI | 222109253 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase
[COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.465168 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCGCTAC GCCGCCGCCG CCCGCTGATC ACCGCGCTTG TCGCACTGTT CGTGCTGGCG
GGCATGGCCG TGTGCATGCT GCTGGCCAGC CAGTACGCGC AGCGCCGTGC GCTGCACGAC
GAAAGCCAGG GGGTGCGGCG CCAGCTCACG CTGTACGGCC AGGCGCTGGA GCAGCGCATC
GACCGCTTTC GCACCCTGCC GGAGGTGCTG GCGCTGGACG CGCAGCTGAG GGACGCGCTG
ACCCACCCGC TCACGCCCGC CGAGGTGGAC GCGCTCAACC GCAAGCTGGA GCAGGCCAAC
GGCGCCAGCC ATTCGTCCAC GCTCACGCTC ATCAACCTGC AGGGCCGCGC CATCGCCGCC
AGCAACTGGC GCGACACCCC CAACAACGTG GGAGAGGACT ACCACTTCCG CCCCTATGTG
CAGCAGGCGC TGGCGCAGGG CCACGGGCGG TTCTACGGCA TCGGCCTGAC CACGGGGGAG
GCGGGCTACT TCCTGTCCAC GGCGATCCGC GGTGATGACG GGCAGACGCT GGGCCTGGTG
GCCATCAAGA TCCTGCTGAC CGAGCTGGAG CGCGAATGGC GCCAGAGCCC CGACGTGGTG
CTGGCCTCGG ACGCGCACGG CGTGGTCTTC CTCGCCAGCC GCGACGCCTG GCGCTACCGG
CTGCTGGCAC CCCTCACGCC CCAGGCGCGC CAGGAGCTGG AAGCCACGCG CCAGTACACC
GGCCAACCGC TCGCGCCGCT GGGCCTGCAG GTGGAGCGGC GGGTGGACGA AGGCACGGTG
CTGGCACGTG CGCAGGAGCC CCCCTTGCCC GGCCCACTGC TGTGGCACAC GCAGGAGCTG
GCGGGCGCCG GCTGGCAACT GCACCTGCTG CACCACGCGG ACAGCGCCAT CGAGGCCCGC
CGCTGGGCGG CCGGCGCGGC CGCGGGCCTG TGGCTGGCGC TGGCACTGCT GGTGCTGTTC
GTGCGCCAGC GGCAGCGCCT GGCCCTGCTG CGCCAGCGCA GCCGCCAGGA GCTGGAGACC
GTGCTGCGCC AGCATGCCCA GGAGCTGCGC ACCGCGCAGG ACGGCATCGT GCAGGCCGCG
CGCGAGGCCG ACACCGGCCT GTCGCGCAGC CTGCAGCACC TGCCGCAGGG CGTGGTGGTC
ATCGACCGCG ACCTGAACCT GGTGGCGTGG AACTCGCGTT ACGTGGAGCT GTTTCGCTTT
CCGCCCGAGC TGATGCGCGT GGGCACGCCG GTGGAGGCGC TGATCCGCCA CAACGCGCGC
CGCGGCCTGC TGGGCGCCAC GCCCACCGAG GACGCCATCC AGCGGCGCCT GCAGCACCTG
CGCAGCGGCA AGCCCCACCT GCATGAGAGC GCCAAGAGCG ACGGCACGGT GCTGGAGATC
CGCGGCAACC CGCTGCCCGA CGGCGGCTTC GTGACCAGCT ACGCCGACAT CACCAGCTAC
AAGAACGCCG CGCGCGAGCT GCGCTCGCTG GCCGACGCGC TGGAGCTGCG CATTGCCGAA
CGCACGCGCG ATCTGGACGC CGCCCGGCGC GAGGCCGAGG CCGCCAACCG CTACAAGACC
CGCTTTGTGG CCGCCGCGGT GCACGACCTG CTGCAGCCGC TGAATGCCGC GCGCATGTTC
GCCTCGCTGC TGCGCGGCCA CCTGCACGAC GCCGCCGGAC GCCAGGTGGC CGACAGCATC
GACGGCGCGC TGGCCGCGCA GGACGGCATC CTCAACAGCC TGCTGGACAT CTCGCGCATG
GAATCGGGCC AGTTGGAGGT GCATGTGCGC GACTTCGCGC TCGGCCCGCT GCTGCAGGTG
ATGCAGCACA ACTTCGGCAT CATCGCCGCC AGCCGGGGCC TGCGCCTGCG CACCGTGGGC
ACGCGCTACG CGGTACGCAG CGACGAGGCG CTGCTGCGGC GCATCCTGCA GAACCTGGTG
TCCAACGCCA TCCGCTACAC GCCCCGCGGG CGCGTGCTGA TCGGCTGCAG GCGCCGCGGC
CGGTACCTGC GCATCGAGGT GCACGACCAG GGCCCCGGCA TTCCCGAGAG CCTGCAGCGC
GAGATCTTCG AGGAGTTCCG CCGCCTGGGC GAGGGCCACA GCCAGGACGG CGACCGTGGT
GCGGGCCTGG GGCTGGCCAT CGTCGAGCGC CTGGGCAAGC TGCTGGGGCA CGAGATCGGC
CTGCGCTCGG AACTGGGGCG CGGCAGCGTG TTCTGGGTGT GCGTGCCGCT GGCCGATGCC
GCCGCCGCAC CCCGCCCCGC CGCCGCGGGC GCAGCCGCCC CTCCCGAGGG CGACCAGCCC
CTGCAGGGCA CCACGGCCTG GTACATCGAT GACGACGCGC CCAGTTGCGA GGCCACCGGC
GCGCTGCTGC GCCGCTGGGG CTGCGAAGTG CCTTTGGCGG GCGGCCCGCA GTCGGCCCTG
GACTTGGCCG CGCCCGGCAA CGCGCCACAG CTGGTGCTGC TGGACGTGCG CATGGGGCCC
TTCCACGGCC CCGACCTGTA CGACCGGCTG TGCACCGTGT GGGGCCAGGC ACCCTCGGTG
GTGCTGGTGA CGGCCGAGCG CAGCAGCACC CTGCGCCGCC AGGCGGCCGA GCGCGGCTGG
GGCTACCTGC TCAAGCCCGT GCGCCCGTCC GCACTGCGCG CGCTCATCAG CCAGATGATG
CTACGGAAAC AGTAG
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| Protein sequence | MPLRRRRPLI TALVALFVLA GMAVCMLLAS QYAQRRALHD ESQGVRRQLT LYGQALEQRI
DRFRTLPEVL ALDAQLRDAL THPLTPAEVD ALNRKLEQAN GASHSSTLTL INLQGRAIAA
SNWRDTPNNV GEDYHFRPYV QQALAQGHGR FYGIGLTTGE AGYFLSTAIR GDDGQTLGLV
AIKILLTELE REWRQSPDVV LASDAHGVVF LASRDAWRYR LLAPLTPQAR QELEATRQYT
GQPLAPLGLQ VERRVDEGTV LARAQEPPLP GPLLWHTQEL AGAGWQLHLL HHADSAIEAR
RWAAGAAAGL WLALALLVLF VRQRQRLALL RQRSRQELET VLRQHAQELR TAQDGIVQAA
READTGLSRS LQHLPQGVVV IDRDLNLVAW NSRYVELFRF PPELMRVGTP VEALIRHNAR
RGLLGATPTE DAIQRRLQHL RSGKPHLHES AKSDGTVLEI RGNPLPDGGF VTSYADITSY
KNAARELRSL ADALELRIAE RTRDLDAARR EAEAANRYKT RFVAAAVHDL LQPLNAARMF
ASLLRGHLHD AAGRQVADSI DGALAAQDGI LNSLLDISRM ESGQLEVHVR DFALGPLLQV
MQHNFGIIAA SRGLRLRTVG TRYAVRSDEA LLRRILQNLV SNAIRYTPRG RVLIGCRRRG
RYLRIEVHDQ GPGIPESLQR EIFEEFRRLG EGHSQDGDRG AGLGLAIVER LGKLLGHEIG
LRSELGRGSV FWVCVPLADA AAAPRPAAAG AAAPPEGDQP LQGTTAWYID DDAPSCEATG
ALLRRWGCEV PLAGGPQSAL DLAAPGNAPQ LVLLDVRMGP FHGPDLYDRL CTVWGQAPSV
VLVTAERSST LRRQAAERGW GYLLKPVRPS ALRALISQMM LRKQ
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