| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_0002 |
|---|
| Symbol | |
|---|
| ID | 7382693 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax ebreus TPSY |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011992 |
|---|
| Strand | + |
|---|
| Start bp | 1636 |
|---|
| End bp | 2742 |
|---|
| Gene Length | 1107 bp |
|---|
| Protein Length | 368 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 643653320 |
|---|
| Product | DNA polymerase III, beta subunit |
|---|
| Protein accession | YP_002551491 |
|---|
| Protein GI | 222109227 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0592] DNA polymerase sliding clamp subunit (PCNA homolog) |
|---|
| TIGRFAM ID | [TIGR00663] DNA polymerase III, beta subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATTGTCC TGAAGGCCAC ACAAGACAAG GTTCTCGCCG TTCTGCAATC GGTTGCCGGC
ATCGTCGAGC GCCGCCACAC GCTGCCCATC CTGGCCAATG TGCTGCTGCG CAAGACGGGC
AATGCCATCC AGCTCACCAC CAGCGACCTG GAGATCCAGA TCCGCACCAC GGCCGAGCTG
GGCGGCGACA CGGGCGACTT CACCACCACG GTGGGTGCAC GCAAGCTCAT CGACATCCTG
AAGACCATGC CCGCCGACCA GACGGTGAGC CTGGAGTCCA ACCAGTCCAA GCTGATCCTG
AAGGGCGGCA AGAGCCGCTT CACACTGCAG ACGCTGCCGG CCGAGGACTT CCCGCTGGTG
CAGGAGGCCG CCAGCTTCGG CCCCGCCTTC AGCGTGCCGC AGAAGGTCCT GAAGAGCCTG
CTGGGGCAGG TGTCGTTCGC CATGGCAGTG CAGGACATCC GCTACTACCT GAACGGCATC
CTGTTCGTGG CCGAGGGCAC TACGCTCTCG CTGGTCGCCA CCGACGGCCA CCGGCTGGCG
TTCGCCAGCG CGCAGCTGGA CGTGGAAGTG CCCAAGCAGG AGGTCATCTT GCCGCGCAAG
ACCGTGCTGG AGTTGCAGCG TCTGCTGTCG GACGCCGACG GCGCCATCGA GATGCAGTTC
GCCAACAACC AGGCCAAGTT CAGCTTCGGC GGCATGGAGT TCGTCACCAA GCTGGTGGAG
GGCAAGTTCC CCGACTACAA CCGCGTGATT CCCAAGAACC ACCACAACAG CGTGACCCTG
GGCCGCGCCC CGCTGCTGGC CAGCCTGCAG CGCACGGCCA TCATGACCAG CGACAAGTTC
AAGGGCGTGC GCCTGAACAT CGAACCCGGC CTGCTGCGTG TGGCGTCGAA CAACGCCGAG
CAGGAAGAGG CGGTGGACGA GCTGGACATC GACTACGGCG GTGACGCCAT CGAGATCGGC
TTCAACGTCA GCTACCTCAT CGACGCCCTG GCCAACATGG GCCAGGACAT GGTGAAGGTC
GACCTGGCCG ATGGCAACAG CTCCGCGTTG ATGACCATCC CCGACAACGA GCACTTCAAG
TACGTCGTGA TGCCCATGCG CATCTGA
|
|---|
| Protein sequence | MIVLKATQDK VLAVLQSVAG IVERRHTLPI LANVLLRKTG NAIQLTTSDL EIQIRTTAEL
GGDTGDFTTT VGARKLIDIL KTMPADQTVS LESNQSKLIL KGGKSRFTLQ TLPAEDFPLV
QEAASFGPAF SVPQKVLKSL LGQVSFAMAV QDIRYYLNGI LFVAEGTTLS LVATDGHRLA
FASAQLDVEV PKQEVILPRK TVLELQRLLS DADGAIEMQF ANNQAKFSFG GMEFVTKLVE
GKFPDYNRVI PKNHHNSVTL GRAPLLASLQ RTAIMTSDKF KGVRLNIEPG LLRVASNNAE
QEEAVDELDI DYGGDAIEIG FNVSYLIDAL ANMGQDMVKV DLADGNSSAL MTIPDNEHFK
YVVMPMRI
|
|---|
| |