| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_9665 |
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| Symbol | |
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| ID | 7381874 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011991 |
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| Strand | + |
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| Start bp | 128401 |
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| End bp | 129123 |
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| Gene Length | 723 bp |
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| Protein Length | 240 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 643653317 |
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| Product | two-component transcriptional regulator LuxR family |
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| Protein accession | YP_002551488 |
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| Protein GI | 222109223 |
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| COG category | [K] Transcription |
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| COG ID | [COG2771] DNA-binding HTH domain-containing proteins |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.024682 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGAAAAATC ATGACATTTA TGAATTTATG GAACGCTGCG ACAATCAAAA GAGCGTCGAT
AATCTGTTTT CGGATTTTGG AACGGTCATC GCGAAACGCG GCTTTCATTC TTACATTTAC
ACCGGGCTGC CAGCGGTGGG TGACGACGTC AAGCATTATG TCGTCAAAAA TGCGTGGCCG
CCGGGATGGA CCGAGCAATT CGAGGGTCTT AACTATTTCG CCGATGATCC CGTCAGTCGG
TGGTCTCTTT CCCAGTCGAA ACCCTTTACC TGGAAAACCG CAAGAGAAGA GACGAAGGCG
ACGGCGCGCA CCAAAGAGAT CCAGCAGGAA GCGGACAGGT ATCGCTTGTG CGATGGCATC
GTTTTCCCGA TGTTCGACCC AAATTCCTGG CAGTCGGTGA TCTCACTCGC AACTGACGAC
AAGGGTGGAT TGGCAAAAGA GAACATTGGC GACCTTTATC TTCTCTCCTC TTATTGTGCG
ATGACGGCAA ACAACCTGCT TCGACGCGCC GAACAAGCGG ATCATCGGTT AACAGACCGG
GAGAAAGAAA TTCTGCAGTG GGTTTCACGC GGGAAGACGG ATTGGGAGAT CGGGACGATC
CTGCGAATGA CCGAGGGCTC CGTTACACAG CGACTGGCCC GCATCCGAGA CACCCTTGGT
GTCAAAAATA GACCGCAGAC CGTTTCACAG GCGATTCGGC TCGGCCTGAT CAATTCGGTC
TAG
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| Protein sequence | MKNHDIYEFM ERCDNQKSVD NLFSDFGTVI AKRGFHSYIY TGLPAVGDDV KHYVVKNAWP
PGWTEQFEGL NYFADDPVSR WSLSQSKPFT WKTAREETKA TARTKEIQQE ADRYRLCDGI
VFPMFDPNSW QSVISLATDD KGGLAKENIG DLYLLSSYCA MTANNLLRRA EQADHRLTDR
EKEILQWVSR GKTDWEIGTI LRMTEGSVTQ RLARIRDTLG VKNRPQTVSQ AIRLGLINSV
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