| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_9653 |
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| Symbol | trbL |
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| ID | 7381868 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011991 |
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| Strand | - |
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| Start bp | 121425 |
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| End bp | 122531 |
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| Gene Length | 1107 bp |
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| Protein Length | 368 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 643653311 |
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| Product | conjugal transfer protein TrbL |
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| Protein accession | YP_002551482 |
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| Protein GI | 222109217 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3846] Type IV secretory pathway, TrbL components |
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| TIGRFAM ID | [TIGR02783] P-type conjugative transfer protein TrbL |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.912606 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGTGCAG CACTGGTTTT GAGATTGGCG CCTTTCGCCA TCGTCGCACT CGCCGCGGTG
GAACCCGCCC TGGCAGCGGA TGGATCGATC CTTACAAACC TGGAAAACAA TGTCCGCTCG
GCCACTCAAG GGTGGCAAGA CACCGTCATG AATGCGGCAA GGTCACTGTT CTGGATCCTG
GCGGGAATAG AATTTGGTAT TGCCGCCGTG TGGTTCGCCA TTGCAGCGCC ATCGCTCGAT
ACGTGGGTCG CAGAGCTGAT ACGGCGTATT ATCTTCATCG GCTTTTTCCT GTTTGTCCTG
CAGCAGGGAC CCGACTTCGC GAAAGCTGTC GTCGACAGTC TGTTTCAGCT GGGGGCGAAC
GGCGGGACGG CTTCGCCAGC GGATGTCTTC AATGCCGGCA TCAAGGTGGC GAGCACCCTG
TCGGAAAAGG TCAAGTTCGG CATTTTCGAA GACAACGCAA TGGCGATTGG CATCATCATC
GCCATGATTG TCGTGGTGAT CTCTTTCTCG CTCGTGGCCG CGATTTTCGT TTCGGTGCTG
GTGGAGATGT ATGTCGGCCT GCTCGCCGGC ATGATCATGC TCGGACTCGG CGGGTCGAGC
TTCACCAAGG ACTTCGCGAT CAAATATCTC GTCTATGCCT TCTCGGTGGG CATGAAGCTG
ATGGCGCTCG TGATGATCGC GCGCATCGGC TCGGAGATCC TGATCGGCCT TTCGAACGAT
GCCAACACTG GAGAAGAACT GCTTGCGAGC CTCGTCATCG CGGGCCTGTC CGTCGTCATC
TTCATGATTG CGATCTACGT GCCGAATATC ATCCAGGGCG TCGTACAGGG CGTGTCGGTC
AGCAGCGGCA TGGAAGCCAT GAGATCCAGC GCACAGGTCA CTGCTTTTGC GGCTTCGACG
GTCGCGGGTG TCGGCGCTGG CGTCGCAGCG GCAGGTACTG CCAAGGCCGC CGGCGCTGGC
ATTCTGGGTC AGGCCTCCGC GGGCGTGAGG GCAGGCGGCT CGGCTTTAGC CGGAACGGCA
GCAAAAGCCG CCATGGGTTC GCATGGCTCG GGCGCGGGCG GCCCATCGAG GTCGATGGGA
CTGCGCAACC ACAAAACATC GAAATAG
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| Protein sequence | MRAALVLRLA PFAIVALAAV EPALAADGSI LTNLENNVRS ATQGWQDTVM NAARSLFWIL
AGIEFGIAAV WFAIAAPSLD TWVAELIRRI IFIGFFLFVL QQGPDFAKAV VDSLFQLGAN
GGTASPADVF NAGIKVASTL SEKVKFGIFE DNAMAIGIII AMIVVVISFS LVAAIFVSVL
VEMYVGLLAG MIMLGLGGSS FTKDFAIKYL VYAFSVGMKL MALVMIARIG SEILIGLSND
ANTGEELLAS LVIAGLSVVI FMIAIYVPNI IQGVVQGVSV SSGMEAMRSS AQVTAFAAST
VAGVGAGVAA AGTAKAAGAG ILGQASAGVR AGGSALAGTA AKAAMGSHGS GAGGPSRSMG
LRNHKTSK
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