Gene Avi_9646 details

Gene Information

• Locus tag: Avi_9646
• ID: 7381863
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Agrobacterium vitis S4
• Kingdom: Bacteria
• Replicon accession: NC_011991
• Strand: -
• Start bp: 117454
• End bp: 118068
• Gene Length: 615 bp
• Protein Length: 204 aa
• Translation table: 11
• GC content: 60%
• IMG OID: 643653306
• Product: hypothetical protein
• Protein accession: YP_002551477
• Protein GI: 222109212

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.035963
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCAATAC TCTCGCGCAA GGGACTGCAA CTCCCTGTCA TCATCGGCGT GGCCGCTCTC 
TTGAGCGGTT GCGTGCTGCC CGAACGGCTC GACGCTACCA TAGTCATGAC CGGCTACCGG 
TATCACGCGG TCCTCGAGGG CAGGGTGGCC GAACCGCGTA CCGTCGGTGC GCTGGCGAAG 
GGACAAGCCA TCCCGCCAAA CCACGAAGCG CAGATGAAAG CGCAAGAAGC TCCTGCACTG 
GCGCTCCCGG GTATGACCCG TTTCGCCTAT GTCAGCCAAG GCCGGTACGA CGTCGCCATG 
AAGGTCGACG GCGAACTCAC AGAAGCCGCG CCGGTGGTCG GATTCCCCAA CACCCGGGGC 
GGCAGCCACA ATTTTCTGAC CATCCGCCGC GAGGCCGATG GAACGATTGT GATTTCGTCG 
CCGGAAGTAC CGGTAAATGC CTTGGCAGAC CTGAACGCCG TGGGCCTTCA GGCCAGTGGG 
AAGATCAGCA TCGAATTTGA CGGAAAGGTG CTTGGGAGCA ATGCCGATGA TCAAACCAGA 
CGCGGTTTAC ACGTCTGGAA CCGCAAGGAT TGGGAGGATC GAGTGCTACT GAAATTGGAT 
CCTGACGGAC GTTAG 

 

Protein sequence

MPILSRKGLQ LPVIIGVAAL LSGCVLPERL DATIVMTGYR YHAVLEGRVA EPRTVGALAK 
GQAIPPNHEA QMKAQEAPAL ALPGMTRFAY VSQGRYDVAM KVDGELTEAA PVVGFPNTRG 
GSHNFLTIRR EADGTIVISS PEVPVNALAD LNAVGLQASG KISIEFDGKV LGSNADDQTR 
RGLHVWNRKD WEDRVLLKLD PDGR