| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_9623 |
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| Symbol | |
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| ID | 7381850 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011991 |
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| Strand | + |
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| Start bp | 85686 |
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| End bp | 87305 |
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| Gene Length | 1620 bp |
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| Protein Length | 539 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 643653294 |
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| Product | transposase |
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| Protein accession | YP_002551465 |
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| Protein GI | 222109200 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3436] Transposase and inactivated derivatives |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.264971 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCATCGG CTCTTGATCT CAGCCTGTTT CCGGACCTTC CGCCAGAGGT GGTGAAGGCG
TTTGCGGCGA TGCAGTTCGA GCTGTCGGTC GAGCGTGCTG CACGTCAGCA TGAGCAGGCT
GTGGTGGCCG AAAAGGACGC GTTCATCTCC GAGTTGAAGG AGCTGATCGA GAAGCTTGAG
GGGCAGGTTC ACGACTACAG GCGCACGAAG TTCGGGCCGA AATCGGAAAA GCTTGATCCG
GCGCAGATGG AACTGGCGCT GGAAGACCTT GAAACGGCGA TCGCCGAAAC ACAGGCGCGG
ATCGCCGCCG TCGAGGAAAA GATCGAAGCC AGCGCATCCG ATCCGGGCAA GGCGGTTCCT
CGCAAGGAGC GCAAGGCCCG TGCACTGCCC GAACACCTGC CGCGGGTCGA GCGCGTGATC
GAGCCCGAGA GCATCGTTTG CCCCTGCGGT TGCGGCAACA TGGTTCGGAT TGGCGAGGAT
CGGACGGAAC GGCTCGACCG GGTCCCGGCA CGCTACGAGG TGATCGTCAC GATCCGCCCG
AAATACGCAT GCCCCAAGGG TCGAACGGGC GTTGTCCAGG CCAAAGCGCC GGCACATCTG
CTGGAAGGGA GCTGGCCGAC CGAAGCCCTT CTGGCTGAGA TTGCCGTCTC CAAGCATTCC
GAACATATGC CGCTTAACCG GCAGGCTGAG GTCATGGCGC GACACGGGGT GCCGATAGAC
CGCACGGTGC TGGCCGACTG GATGGGCCGC ACGGGCAGCG AAATCGCACC GGTGGTCGAC
CATATGGCCA AACGGCTACT ATGGGAAAGC ACGCGCCTCT ATGTCGACGA GACGACCGCC
CCGGTGCTGG ATCCTGGGCG AGGCAAGACA AAGACCGGCT ATCTCTGGGC CGTGCTGCGC
GACGACCGCG GCTGGAATGG TTCTGCTCCG TCAGGCGTGG TGTTCCATTA TCGGCCCGGG
CGTAGAGGAG AATATGCCGC TGAGATCCTC GACGGGTTCA ACGGGACAAT CCAGGTGGAT
GCCTACGGCG GCTATTCGCA CCTCGCCACG TCGGATCGTA ACGGTGGCGA ACCCTTGAAG
CTGGCTTTCT GTTGGGCACA TGGGCGTAGA AAGCTGATCA AGGCCGCGCC TAAGAGCGGA
TCACCCATCG TCGACGAGGC GCTCATTCGC ATCGCCGCGC TATACAAGAT CGAAGACAGT
ATCCGAGGTT CAGATCCCGA ACATCGCCGG GCAGTTCGAC AGGACCTGTC CCTCCCGCTG
GTGGACGAGT TCTTCACCTG GCTGGCAGCC CAGGCCGCGC GCGTCTCACG CAAGTCTGAC
CTCGGAAAAG CCCTGGCCTA TATGCTGACG CGACAGGATG GCTTCCGGCT GTTCCTGGAC
GATGGCCATG TCGATATCGA CTCCAACCTG GTGGAAAACG CGATCCGCCG CCCGGCCATG
AACCGCCGCA ATGCGCTCTT TGCGGGGCAC GATGAAGGGG GGCGCAATTG GGCTCGGTTT
GCCAGTCTCA TCGGCACTTG CAAAATGAAC GGCGTTGAAC CTTACACCTA TCTGTGCGAC
CTCTTCACCC GCCTCGCAAA CGGCCACCTC GTCAAAGACA TCGATGCCCT GATGCCCTGA
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| Protein sequence | MSSALDLSLF PDLPPEVVKA FAAMQFELSV ERAARQHEQA VVAEKDAFIS ELKELIEKLE
GQVHDYRRTK FGPKSEKLDP AQMELALEDL ETAIAETQAR IAAVEEKIEA SASDPGKAVP
RKERKARALP EHLPRVERVI EPESIVCPCG CGNMVRIGED RTERLDRVPA RYEVIVTIRP
KYACPKGRTG VVQAKAPAHL LEGSWPTEAL LAEIAVSKHS EHMPLNRQAE VMARHGVPID
RTVLADWMGR TGSEIAPVVD HMAKRLLWES TRLYVDETTA PVLDPGRGKT KTGYLWAVLR
DDRGWNGSAP SGVVFHYRPG RRGEYAAEIL DGFNGTIQVD AYGGYSHLAT SDRNGGEPLK
LAFCWAHGRR KLIKAAPKSG SPIVDEALIR IAALYKIEDS IRGSDPEHRR AVRQDLSLPL
VDEFFTWLAA QAARVSRKSD LGKALAYMLT RQDGFRLFLD DGHVDIDSNL VENAIRRPAM
NRRNALFAGH DEGGRNWARF ASLIGTCKMN GVEPYTYLCD LFTRLANGHL VKDIDALMP
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