Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_9615 |
Symbol | |
ID | 7381953 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011991 |
Strand | + |
Start bp | 82444 |
End bp | 82893 |
Gene Length | 450 bp |
Protein Length | 149 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 643653288 |
Product | Transposase |
Protein accession | YP_002551459 |
Protein GI | 222109194 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3415] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.1041 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | CTGATTATGC TTCCATTTGC CCATGGAAGG AGAACCGCCA TGGCTAAGCA TCCGATTGAG TTGCGTGTGC GTGTTGTTGC GTTTGTCGAG GAAGGAAATA GCCATCGGGA AGCCGCGCGA CATTTCCGGG TTTCGCCGAG ATTTGTGAAC AATATGGTGA TCCTGAAGCG TGCATCCGGT GCGCTGAGGC CGGCCCGGCA GGGTCATCTG GGCGGCGGCA AGCTGACGGG GCATGAAGAC TGGGTTCGTG AACGGTTGCC GAGAACGGTT GCCGAGAACG GCGATCTGAC GCTGGATGAA TTGGGCGTCG AGCTGCATGG GCGCGGCGTC TCGGTCGATC GCTCGGCGAT TTGCCGGCTG CTGCATCGGC TCGGAATCAG CCATAAAAAA AGCCTGCGGG CAAGCGAGCT GTCAATGCCG CGTGAATTTC CCCCGATTGT GCCGAAGTAG
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Protein sequence | MIMLPFAHGR RTAMAKHPIE LRVRVVAFVE EGNSHREAAR HFRVSPRFVN NMVILKRASG ALRPARQGHL GGGKLTGHED WVRERLPRTV AENGDLTLDE LGVELHGRGV SVDRSAICRL LHRLGISHKK SLRASELSMP REFPPIVPK
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