Gene Avi_9615 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_9615 
Symbol 
ID7381953 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011991 
Strand
Start bp82444 
End bp82893 
Gene Length450 bp 
Protein Length149 aa 
Translation table11 
GC content59% 
IMG OID643653288 
ProductTransposase 
Protein accessionYP_002551459 
Protein GI222109194 
COG category[L] Replication, recombination and repair 
COG ID[COG3415] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.1041 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CTGATTATGC TTCCATTTGC CCATGGAAGG AGAACCGCCA TGGCTAAGCA TCCGATTGAG 
TTGCGTGTGC GTGTTGTTGC GTTTGTCGAG GAAGGAAATA GCCATCGGGA AGCCGCGCGA
CATTTCCGGG TTTCGCCGAG ATTTGTGAAC AATATGGTGA TCCTGAAGCG TGCATCCGGT
GCGCTGAGGC CGGCCCGGCA GGGTCATCTG GGCGGCGGCA AGCTGACGGG GCATGAAGAC
TGGGTTCGTG AACGGTTGCC GAGAACGGTT GCCGAGAACG GCGATCTGAC GCTGGATGAA
TTGGGCGTCG AGCTGCATGG GCGCGGCGTC TCGGTCGATC GCTCGGCGAT TTGCCGGCTG
CTGCATCGGC TCGGAATCAG CCATAAAAAA AGCCTGCGGG CAAGCGAGCT GTCAATGCCG
CGTGAATTTC CCCCGATTGT GCCGAAGTAG
 
Protein sequence
MIMLPFAHGR RTAMAKHPIE LRVRVVAFVE EGNSHREAAR HFRVSPRFVN NMVILKRASG 
ALRPARQGHL GGGKLTGHED WVRERLPRTV AENGDLTLDE LGVELHGRGV SVDRSAICRL
LHRLGISHKK SLRASELSMP REFPPIVPK