Gene Avi_9606 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_9606 
Symbol 
ID7381946 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011991 
Strand- 
Start bp74455 
End bp75141 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content48% 
IMG OID643653281 
Producthypothetical protein 
Protein accessionYP_002551452 
Protein GI222109187 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAACTA GACAGCTACT CCGGAACCAC TACGTTCAGG TGGATAGGAG CAAAAAACCC 
TATTGTTTTT TACTCGCGAA GGAGCCCGAA TACAACGATA TTCTAAATAA CTATCGTATC 
CCCCTCGGCG AATATCAGTT CAAGCGCACA CTATTCGCGC GAGAATGGCT CTATAAGGAC 
GTGTGGCATG AGATGGTGAG TTTTGCTTTT TGCCGAGAAC CATTGTCTCG TTGCATCAGC 
GCATTTTTCT ACCTCTGGGA GGCTGAGGCG CAGAGGCGCG CTTGGTTACC GTCGTTCAAC 
GGCGCACTTA ACGCCCATGG TTACGGGCTG GATTATTCCT TCGACCAATT TCTCGATGCA 
GTCGTAGCAT GCAGAGATTC AGGTTCAAAC TTCTCGCCAA TGGGGCTCCA TTTTTCGACC 
CACACCGCGA CTATGTGGGA TGACGTCACT GATAGTGGTG GCTCGATCTT GTTGTCGAAT 
ATTTTTAGGC TTGAGGATCT CATTCATGGG ATAAATCACG TTTTCTCCGT ATGTGGAGTT 
CCTGACAAAG CCAAACCTTT GCTGCGGGAT ATCAACACCA ACGAAACGAA GCGGCCCTTC 
ACGCCTAGCA GACACCATAT TGCAAAGGTC GAAGACCTTT ATGGCAAAGA TTTTGAACTT 
TACGAGACTT ATGGCCGCCT TTTCTAG
 
Protein sequence
MSTRQLLRNH YVQVDRSKKP YCFLLAKEPE YNDILNNYRI PLGEYQFKRT LFAREWLYKD 
VWHEMVSFAF CREPLSRCIS AFFYLWEAEA QRRAWLPSFN GALNAHGYGL DYSFDQFLDA 
VVACRDSGSN FSPMGLHFST HTATMWDDVT DSGGSILLSN IFRLEDLIHG INHVFSVCGV 
PDKAKPLLRD INTNETKRPF TPSRHHIAKV EDLYGKDFEL YETYGRLF