Gene Avi_9566 details

Gene Information

• Locus tag: Avi_9566
• ID: 7381925
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Agrobacterium vitis S4
• Kingdom: Bacteria
• Replicon accession: NC_011991
• Strand: +
• Start bp: 54290
• End bp: 54841
• Gene Length: 552 bp
• Protein Length: 183 aa
• Translation table: 11
• GC content: 64%
• IMG OID: 643653260
• Product: hypothetical protein
• Protein accession: YP_002551431
• Protein GI: 222109166

Plasmid Coverage information

• Num covering plasmid clones: 17
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACCCCGC TCCATTCCTC CTCCCGACTG ATCATCCTCG CCTGCTCGGC GACAAAGCGT 
GCGGAGCCGG ACTATATGCC GGCACTCGAG CGCTACGACG GACCTCTTTG GAAGACCCTC 
CGTGCCGCCG ATCCGGAAGG GATGAAAGCC AGTGTCGCCT TCCTGTCGGC ACGTCTTGGC 
TTTCGCGCCG CCGACACGCC GATTGAGATG TACGACGCCC GGATGACCCC GGAGATCGCA 
GCAGCCATAA AGGCCGGCGG TCTCGCAACG CGGTGGCCCC GCCCGAAAAC CCAGCGCCGG 
GTGATGCCAT CCGGCGAACA TGCGGGCGAA CATATCGCCA GCATGACGCA GTACGGGCGC 
GCACCGTTTT GCGAAGTCGC GCTTGTCGGT GGCCATCTCT ACCTCGATGT CATGCGGCAT 
TTCGTCGGGC TGTTTCGCGA TGGCGGCTTT GTCTCAGCCG ATGCGACGAT CATCGAGATC 
AACGGACCGA TCGGCATGAT GCGCCGTGAC CTCCGGCTCT GGCTGGCCGG TGAGGGTGGG 
GGGACAGACT GA 

 

Protein sequence

MTPLHSSSRL IILACSATKR AEPDYMPALE RYDGPLWKTL RAADPEGMKA SVAFLSARLG 
FRAADTPIEM YDARMTPEIA AAIKAGGLAT RWPRPKTQRR VMPSGEHAGE HIASMTQYGR 
APFCEVALVG GHLYLDVMRH FVGLFRDGGF VSADATIIEI NGPIGMMRRD LRLWLAGEGG 
GTD