| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_9542 |
|---|
| Symbol | |
|---|
| ID | 7381910 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Agrobacterium vitis S4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011991 |
|---|
| Strand | - |
|---|
| Start bp | 44261 |
|---|
| End bp | 44698 |
|---|
| Gene Length | 438 bp |
|---|
| Protein Length | 145 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 643653246 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002551417 |
|---|
| Protein GI | 222109152 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.140026 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGATGATGG CGGTTGCCTC TGACACGACG ATCGATCAAA GCAGCGGAAG CAGAATGCAA
GTTTTTACGG AGTATAACGG CAAACGGTTC GTGACGAACA TGGATTTCCT CCTGGCGGAT
GAGGATGATT ACGCCACCTA CCTTCTCAAT GCGACGCGGC TTAATCAAGA GCTCGGAAAG
GATCCGTTCT TTTGGGCAAG TGATCGCACA GCTGTTCTGG CGCAGACAGA CTTCAAACCC
GGCAAATACC ATTGCTGGGT TACGAGGCTC GAAGCGCGCC AGGAAATAGC AATCCCGATC
CTGACGCAGA CTTCAGAGGG CGAAGTTACG GTGCTTTCCG GCCGCCACCG TATCATGGCG
ATGATGGACA ACGGTTTTGA ACAAATTCCG GTGCGGGCGA AGGTCGCGCT TCGAGAAAAG
TTGGCCCCTC TCGCTTGA
|
|---|
| Protein sequence | MMMAVASDTT IDQSSGSRMQ VFTEYNGKRF VTNMDFLLAD EDDYATYLLN ATRLNQELGK
DPFFWASDRT AVLAQTDFKP GKYHCWVTRL EARQEIAIPI LTQTSEGEVT VLSGRHRIMA
MMDNGFEQIP VRAKVALREK LAPLA
|
|---|
| |