Gene Avi_9532 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_9532 
SymbolpbpB2 
ID7381902 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011991 
Strand
Start bp33816 
End bp35573 
Gene Length1758 bp 
Protein Length585 aa 
Translation table11 
GC content55% 
IMG OID643653238 
Productpenicillin-binding protein 
Protein accessionYP_002551409 
Protein GI222109144 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0768] Cell division protein FtsI/penicillin-binding protein 2 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.110863 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGTTTC TTTCTCGTAT CATCACCATT AGAACAAAGG CGCATTTTTC GTCGGTTGCG 
CGTCGTCGAT CAGCATCATT CGGTCCTGGG AAGCATAAAG GTAATGAAGC GAGACAACGC
ATCCTTGTTC TGATGGGGGG GTTCTGCGTT CTCTATACGG TGATTGGCGC ACGACTTGTC
CAATATGGCA CTGCATCGCC CCTGGTCACG AGTTCGATCA GTGCTCCTGG GTTTGGCATT
GCTTCACGCC CGGATATCGT GGACCGGAAC GGCGAACTCC TTGCCACGGA CCTCAATATG
GTGTCACTTT ATGCGGAACC AAGGAAGATC GTTGACATTG ACGAAGCCGT GGAGAAGCTA
TCGACCGTCA TCAAGGGGAT CGACTGGGCC GATACCTACA AAAAGCTGCA ATCCAAATCA
GCGTTCCAGT GGCTCCGCCG CCGACTGACG CCGCGCCAGC AAGCAGATAT CCTCGCGCTC
GGCATCCCTG GTATTGGGTT CCGTCCCGAG AAACAGCGTT TCTATCCGGG CGGCGCAACG
GCAGCCCATA TCCTTGGACA CGTCAACATC GACAATAAGG GGCTCGCAGG GATGGAGCGC
TATATCGATC AGCAAGGACT TGCTGATCTG CGTGCCGCAG GCCTGACCGA CAACGCCCAC
CTCGATCCTG TGCGGCTGTC CATCGATCTA AGGGTGCAGA ACATCGTCCA TGACGTGATC
GCCGAGGCAA TGATCAACTA CAAAGCTGAA GCCGCTGGGG CTGTTGTGCT AGACGCCGAG
ACGGGGGAAA TCCTCGCCAT GGCATCAGTC CCCGACTACA ATCCAAACGA ACCGTCTAGA
ACCCTCCCTG ACGGCTCTGT CGATAAAGAG TATGAAAAAG GCTGGTTCAA CCGGATGAGC
AACGCGACCT ACGAAATGGG ATCGACGTTC AAAAGCTTCA CGCTTGCGAT GGGGTTGGAC
GAGGGGAAAA TCGGGCTTAA TTCTGTCTTG GATGCTTCGA GGCCAATCAA AATGGGCGGT
TTTACCATTC ATGATGACCA TGGTCAGGGA CGCCCTCTCA CTGTCCCGGA GGTCTTCCAA
TATTCATCAA ATATCGGAAC TGCCAAGATT GCGACAATGG TGAATCTTAA AGACCATCAG
GCCTTCCTGA CCAAGCTGGG CCTTCTGTCG AAGATGACGA CTGAACTGCC CGAAGTTGCC
ACCCCCACTC AGCCACGTGT CTGGAAGCCG CTCAATCAAG TGACGATATC CTTCGGCCAT
GGCGTTGCAA CCACACCGCT GCAAACCGCC GTAGCAGGGG CGGCCCTTAT TAACGGTGGA
AAGCTCTTTT CACCGACCTT CCTGGCCAGA AGCCCTGATG AGGCCGATGT CGTGGTGAAG
CAGGTCATTC AGCCGAAGAC CAGTGCAGAC ATGCGATACC TCTTCCACTG GAACGGGATC
AAAGGTTCCG GCAGGAACGC ACAGGTCCAG GGGTTCAACG TTGGGGGCAA AACGGGTACC
GCCGACAAGG TTATTAACGG TAAATACGCG GCGCACCTGA ACTTCAACGC CTATCTGGCC
GGATTCCCAA TTGACAAGCC TAGATACGTT GTGTTGACCG TCATCGACGC ACCATTAACC
GGGGAAAAGG GAGGTAGGCT AGCTGCGTAC ACCGCTGCCC CGATGGCGAA GGAAGTCATA
AGCAGATCGG CAGCCCTTCT TGGTGTACAG CCTCGCTTCG GGAACGATGA CGATCCGCAG
TTACTAACTA ACTACTGA
 
Protein sequence
MSFLSRIITI RTKAHFSSVA RRRSASFGPG KHKGNEARQR ILVLMGGFCV LYTVIGARLV 
QYGTASPLVT SSISAPGFGI ASRPDIVDRN GELLATDLNM VSLYAEPRKI VDIDEAVEKL
STVIKGIDWA DTYKKLQSKS AFQWLRRRLT PRQQADILAL GIPGIGFRPE KQRFYPGGAT
AAHILGHVNI DNKGLAGMER YIDQQGLADL RAAGLTDNAH LDPVRLSIDL RVQNIVHDVI
AEAMINYKAE AAGAVVLDAE TGEILAMASV PDYNPNEPSR TLPDGSVDKE YEKGWFNRMS
NATYEMGSTF KSFTLAMGLD EGKIGLNSVL DASRPIKMGG FTIHDDHGQG RPLTVPEVFQ
YSSNIGTAKI ATMVNLKDHQ AFLTKLGLLS KMTTELPEVA TPTQPRVWKP LNQVTISFGH
GVATTPLQTA VAGAALINGG KLFSPTFLAR SPDEADVVVK QVIQPKTSAD MRYLFHWNGI
KGSGRNAQVQ GFNVGGKTGT ADKVINGKYA AHLNFNAYLA GFPIDKPRYV VLTVIDAPLT
GEKGGRLAAY TAAPMAKEVI SRSAALLGVQ PRFGNDDDPQ LLTNY