| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_9516 |
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| Symbol | rpsB |
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| ID | 7381888 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011991 |
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| Strand | - |
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| Start bp | 10980 |
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| End bp | 11903 |
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| Gene Length | 924 bp |
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| Protein Length | 307 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 643653224 |
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| Product | 30S ribosomal protein S2 |
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| Protein accession | YP_002551395 |
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| Protein GI | 222109130 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0052] Ribosomal protein S2 |
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| TIGRFAM ID | [TIGR01011] ribosomal protein S2, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCTCTTC CAGATTTTAG CATGCGTCAG CTTCTCGAGG CCGGGGTTCA CTTCGGTCAT
CAGACAGGCC GATGGAACCC GAAGATGAAG CCGTACATTT TCGGCGATCG CAGCAACATC
CACATCATCG ACCTGGGCCA GACCGTTCCG CTTCTGTCTC GCGCTCTTCA GGTTGTTTCT
GACACGGTCG CTCGCGGCGG TCGCGTTCTG TTCGTTGGTA CGAAGCGGCA GGCTTCCGAA
ATCATCGCAG ACAGCGCAAA GCGTTCGGCT CAGTATTACG TTAACTCCCG CTGGCTCGGC
GGCATGATGA CGAACTGGAA GACGATTTCG AACTCGATCC AGCGTCTTCG CAAGCTCGAC
GAAATCCTGA ACTCGGAAGG CTCCGGCTAT TCCAAGAAGG AGCGTCTGAC GCTTGAGCGT
GAACGCGAGA AGTTGGACAA GGCTCTCGGC GGTATCCGCG ATATGGGCGG CACCCCTGAC
CTGATGTTCA TCATCGACAC CAACAAGGAA AAGATCGCGA TCGAAGAAGC CAAGCGTCTT
GGCATTCCTG TCGTTGCGAT CATCGACACC AACTGCGATC CGGACAGCAT CGACTTCCCG
ATCCCAGGCA ACGACGACGC TTCGCGCGCC ATTTCGCTGT ATTGCGATCT GATCGCTCGC
GCCGCCATCG ATGGTATCGG TCGCCAACAA CGAGCGTCCG GGAGAGATCT GGGTGCTTCG
CCAGAGAGTT TTGCTTTAGA GGATCAATCT GACGGCGAAT CTGCTAAAGT TGTCAAAATT
TCTGAAGATG TCGGCGCGGG CGACGCGAAT AACCACAGAT CCTATCAAGA CTTTCCCCCG
CCTACCCGAT CAGTCCCTGT AAGACCTGCC GAGGCAAAAC CGCAAGGTGC CCCCCCGGTC
AAGCCCCCTA AAAATAAAGG CTGA
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| Protein sequence | MALPDFSMRQ LLEAGVHFGH QTGRWNPKMK PYIFGDRSNI HIIDLGQTVP LLSRALQVVS
DTVARGGRVL FVGTKRQASE IIADSAKRSA QYYVNSRWLG GMMTNWKTIS NSIQRLRKLD
EILNSEGSGY SKKERLTLER EREKLDKALG GIRDMGGTPD LMFIIDTNKE KIAIEEAKRL
GIPVVAIIDT NCDPDSIDFP IPGNDDASRA ISLYCDLIAR AAIDGIGRQQ RASGRDLGAS
PESFALEDQS DGESAKVVKI SEDVGAGDAN NHRSYQDFPP PTRSVPVRPA EAKPQGAPPV
KPPKNKG
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