| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_9510 |
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| Symbol | intX |
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| ID | 7381884 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011991 |
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| Strand | - |
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| Start bp | 7190 |
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| End bp | 8302 |
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| Gene Length | 1113 bp |
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| Protein Length | 370 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 643653220 |
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| Product | phage-related integrase |
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| Protein accession | YP_002551391 |
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| Protein GI | 222109126 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0464246 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | CTGGACGCGC TCGATGCCAT CCTGCCCTTC GACCGGCGCG ACCAGCTCGC CGAGTTGCTC
ACCGACGACG ACGTCGCGAC GCTCAAGCAC CTCGCCAGCG AAGGCATGGG CGACAACACC
ATGCGGGCGC TGGCGTCCGA TCTCGCCTAT CTGGAGGCGT GGTGCGTGCT CGCAACAGGC
ACTCCCCTCC CCTGGCCCGC ACCAGAAAGT TTGTTGCTGA AATTCGTCGC CCACCATCTG
TGGGATCCAG CCGAGCGTGA AACCAATGCC GATCACGGAA TGCCGGAGGA CGTGGCGATC
GCGCTTCGTG TCAAGGGACT GCTCAGAAGC ACTGGCCCGC ATGCGCCGGC AACTGTCCGC
CGTCGACTGA CGAGCTGGTC GATCCTGACC CGTTGGCGTG GCCTGACCGG ATCGTTTTCG
GCGCCGTCGC TGAAAAGCGC GCTTCGGTTG GCCGTCCGTG CCAGCAACCG GCCCAGACAG
AGAAAAAGCA AGAAGGCCGT GACCGGCGAT ATCCTCGCCA AGCTGCTCAC CGCCTGTGCC
GGCGATCGGC TGGTCGATCT GCGCGACCGG GCGCTGCTGC TGATGGCGTT TGCGTCCGGC
GGCCGCCGGC GTTCCGAGGT AGCAGGCTTG CGCGTCGAGG ATCTGATGGA AGAGGAACCA
GTCCGCGCAA ACCCCTCCGA CGAGCTCTCC CCTCTTCTGC CCTGCCTCAC CATCCGTCTC
GGTCGCACCA AAACCACGTC GGCTGACGAT GATGAACATG TCGTGCTGAT CGGCAGGCCT
GTGACCGCAC TCAAGCATTG GCTTGAACAG GCAAAGATCG AAGCAGGACC CGTCTTCCGC
CGCATCGACC AATGGGGCAA TCTCGACCGC CATGCCCTGA CGCCGCAGTC CGTCAATCTT
ATCCTTAAGA CGCGGATAGC ACAGGCTGGT CTCGATCCAA TGCAGTTCTC CGCCCATGGC
CTGCGATCGG GTTACCTTAC GGAGGCTGCC AACCGCGGCA TTCCGCTGCC TGAAGCGATG
CAGCAGTCTC TGCACAAGTC GGTCACTCAG GCGTCGGGGT ACTACAACAA CACCGAACGC
AAACTGGGAC GGGCGGCACG CCTGGTGCTC TGA
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| Protein sequence | MDALDAILPF DRRDQLAELL TDDDVATLKH LASEGMGDNT MRALASDLAY LEAWCVLATG
TPLPWPAPES LLLKFVAHHL WDPAERETNA DHGMPEDVAI ALRVKGLLRS TGPHAPATVR
RRLTSWSILT RWRGLTGSFS APSLKSALRL AVRASNRPRQ RKSKKAVTGD ILAKLLTACA
GDRLVDLRDR ALLLMAFASG GRRRSEVAGL RVEDLMEEEP VRANPSDELS PLLPCLTIRL
GRTKTTSADD DEHVVLIGRP VTALKHWLEQ AKIEAGPVFR RIDQWGNLDR HALTPQSVNL
ILKTRIAQAG LDPMQFSAHG LRSGYLTEAA NRGIPLPEAM QQSLHKSVTQ ASGYYNNTER
KLGRAARLVL
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