| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_9502 |
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| Symbol | repB |
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| ID | 7381877 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011991 |
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| Strand | + |
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| Start bp | 1493 |
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| End bp | 2491 |
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| Gene Length | 999 bp |
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| Protein Length | 332 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 643653213 |
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| Product | replication protein B |
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| Protein accession | YP_002551384 |
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| Protein GI | 222109119 |
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| COG category | [K] Transcription |
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| COG ID | [COG1475] Predicted transcriptional regulators |
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| TIGRFAM ID | [TIGR00180] ParB-like partition proteins
[TIGR03454] plasmid partitioning protein RepB |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.627889 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGGGCC GTGACATTCT CAAGAATATG GTCAGCTCTG CTGGGGATGA AGCACCGAAG
GCGAGCGTTC AGTCCCATCC ACAGCACAAG CCTGCGGGCG CCGTTCGCGC CATGAACCTT
TCGCTTGGCC GTCTCGGTGA TGAAGCCGCC GCGGCCAAAG AGCTGCGGTA CGCGCTTGCA
GCCGGGGACA AGGTTGTCGA GTTGAGCCCG GGCCAGATTG AGGCCTCGTT CATTCAGGAT
CGTATTCCAA CAAACAACGA TGCTGCCCTT GAGGAACTGA TTGCCTCGAT GCGTCAAAGC
GGCCAGCAGG TCCCAATCCT GGTGCGGCCA CATCCTTCGA AGGAGAACCA TTACCAGGCG
GCTTATGGGC ACCGCCGATT GCGTGCGGCC ATCGCTCTGG AACGCCCGAT CCGAGCGATC
GTGCGCCAGC TCTCCGACGA GGAACTGATT GTCGCGCAAG GTCAAGAGAA CGGGCCACGC
ATCGATCTCA GTTTTATCGA GCGCGCCCTG TTTGCAAAAA GACTTTTGCA GCATGGTTTT
GATCGCGACA GAATCTCCCA GGCCCTGTCT GTCGACAAGC CTGAGACATC GCGGCTCCTA
CAGGTCGCGG ACGCCATCCC GACAGATATC ATCCTGGCAA TCGGGCCTGC TTCGAAGATC
GGACGGCCCC GCTGGTTGGC CTTTGCCGAA CTATTGAAGG ACAAAGCAGC GGCCGACCGG
ATTGCCGACA CCGTCGCCGA AGCTCAGTTC GGAGCAATCG ATACGAACGA ACGGTTTGCC
CGTTTGTGGG CGCAGGCCCA AGGCCCCAAA GCTTCGAAGA AGGACACCGG CGGTAAGATC
CGCACGCGCA AGGGCATCGT TCTCGCATCA ATGGAACGAA CAGCCAAAGG CGCCAAAATC
ACGGTTACAT CAGAAGAGTT CGCACAGTTC CTTGATGCCA GAATGAGCGA TCTTGTTGAG
CAGTTCGAAA AAGAAAACTC TTCTGAAACA AACCATTAG
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| Protein sequence | MKGRDILKNM VSSAGDEAPK ASVQSHPQHK PAGAVRAMNL SLGRLGDEAA AAKELRYALA
AGDKVVELSP GQIEASFIQD RIPTNNDAAL EELIASMRQS GQQVPILVRP HPSKENHYQA
AYGHRRLRAA IALERPIRAI VRQLSDEELI VAQGQENGPR IDLSFIERAL FAKRLLQHGF
DRDRISQALS VDKPETSRLL QVADAIPTDI ILAIGPASKI GRPRWLAFAE LLKDKAAADR
IADTVAEAQF GAIDTNERFA RLWAQAQGPK ASKKDTGGKI RTRKGIVLAS MERTAKGAKI
TVTSEEFAQF LDARMSDLVE QFEKENSSET NH
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