| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_4504 |
|---|
| Symbol | |
|---|
| ID | 7387169 |
|---|
| Type | rRNA |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Agrobacterium vitis S4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011989 |
|---|
| Strand | - |
|---|
| Start bp | 3321344 |
|---|
| End bp | 3322828 |
|---|
| Gene Length | 1485 bp |
|---|
| Protein Length | |
|---|
| Translation table | |
|---|
| GC content | 55% |
|---|
| IMG OID | 643652688 |
|---|
| Product | 16S ribosomal RNA |
|---|
| Protein accession | |
|---|
| Protein GI | |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | CTCAACTTGA GAGTTTGATC CTGGCTCAGA ACGAACGCTG GCGGCAGGCT TAACACATGC
AAGTCGAGCG CCTCGCAAGA GGAGCGGCAG ACGGGTGAGT AACGCGTGGG AATCTACCGT
ACCCTACGGA ATAGCTCCGG GAAACTGGAA TTAATACCGT ATACGCCCTT AGGGGGAAAG
ATTTATCGGG GTATGATGAG CCCGCGTTGG ATTAGCTAGT TGGTGGGGTA AAGGCCTACC
AAGGCGACGA TCCATAGCTG GTCTGAGAGG ATGATCAGCC ACATTGGGAC TGAGACACGG
CCCAAACTCC TACGGGAGGC AGCAGTGGGG AATATTGGAC AATGGGCGCA AGCCTGATCC
AGCCATGCCG CGTGAGTGAT GAAGGTCTTA GGATTGTAAA GCTCTTTCAC CGATGAAGAT
AATGACGGTA GTCGGAGAAG AAGCCCCGGC TAACTTCGTG CCAGCAGCCG CGGTAATACG
AAGGGGGCTA GCGTTGTTCG GAATTACTGG GCGTAAAGCG CACGTAGGCG GATAATTAAG
TCAGGGGTGA AATCCCGCAG CTCAACTGCG GAACTGCCTT TGATACTGGT TATCTTGAGT
ATGGAAGAGG TAAGTGGAAT TGCGAGTGTA GAGGTGAAAT TCGTAGATAT TCGCAGGAAC
ACCAGTGGCG AAGGCGGCTT ACTGGTCCAT TACTGACGCT GAGGTGCGAA AGCGTGGGGA
GCAAACAGGA TTAGATACCC TGGTAGTCCA CGCCGTAAAC GATGAATGTT AGCCGTCGGC
AAGTTGACTT GTCGGTGGCG CAGCTAACGC ATTAAACATT CCGCCTGGGG AGTACGGTCG
CAAGATTAAA ACTCAAAGGA ATTGACGGGG GCCCGCACAA GCGGTGGAGC ATGTGGTTTA
ATTCGAAGCA ACGCGCAGAA CCTTACCAGC TCTTGACATC CTGTGACCGC CACGGAGACG
TGGTTTTCCT TTCGGGGACA CAGAGACAGG TGCTGCATGG CTGTCGTCAG CTCGTGTCGT
GAGATGTTGG GTTAAGTCCC GCAACGAGCG CAACCCTCGC CCTTAGTTGC CAGCATTCAG
TTGGGCACTC TAAGGGGACT GCCGGTGATA AGCCGAGAGG AAGGTGGGGA TGACGTCAAG
TCCTCATGGC CCTTACGGGC TGGGCTACAC ACGTGCTACA ATGGTGGTGA CAGTGGGCAG
CGAGACCGCG AGGTCGAGCT AATCTCCAAA AGCCATCTCA GTTCGGATTG CACTCTGCAA
CTCGAGTGCA TGAAGTTGGA ATCGCTAGTA ATCGCAGATC AGCATGCTGC GGTGAATACG
TTCCCGGGCC TTGTACACAC CGCCCGTCAC ACCATGGGAG TTGGTTTTAC CCGAAGGTCG
TGCGCTAACC GCAAGGAGGC AGCGAACCAC GGTAGGGTCA GCGACTGGGG TGAAGTCGTA
ACAAGGTAGC CGTAGGGGAA CCTGCGGCTG GATCACCTCC TTTCT
|
|---|
| Protein sequence | |
|---|
| |