Gene Avi_4382 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_4382 
Symbol 
ID7387956 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011989 
Strand+ 
Start bp3715400 
End bp3715924 
Gene Length525 bp 
Protein Length174 aa 
Translation table11 
GC content58% 
IMG OID643653026 
Producthypothetical protein 
Protein accessionYP_002551197 
Protein GI222150240 
COG category[S] Function unknown 
COG ID[COG5468] Predicted secreted (periplasmic) protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGTCGTCTG ATTCACGCGT AAATCTATCC CGTCGCGCGG TTCTTGCCGC GTCCGTTGGT 
CTGCTTGGCG CCCTCGCGGG TTGTCAGGTC AGGCCGCTCT ATGGGGAGGC TCTTGGCACC 
CGTAAGCTGA TGGCCTCCAT TGGCTTCTCT CCAGCAACGG ACAGGGTGGG GCAGGAGGTT 
CGCAACCGAT TGATCTTCCT CGCCGCTGGC GGGCAGGGCG AGCCGGCGCA TCCTGAATAT 
CTCGTCACCC TGGTCGTTCA TACCGACACG ACGGAAGTCC TGATCAACGA AAGTACCGAC 
CGTGCGACAG CCGGTCGCGT GACAGTCAGC GCAGACTATA CATTGAAGAA GGCAAGTGAC 
CTTTCGGTTA TGCGTATTGC CCATCGCCAG TCCGTCGCGC TGGTTGATTT TCCGACCCAG 
GAGTTTGCCA AGCTTCGCGC TGTAAGAGAT GCTGAAAATC GCGCTGCGCG GGAATTGGCA 
GAGTTGATCT CTGCAGATTT GGCTAGCCTG CTGGTTCGTA AATAA
 
Protein sequence
MSSDSRVNLS RRAVLAASVG LLGALAGCQV RPLYGEALGT RKLMASIGFS PATDRVGQEV 
RNRLIFLAAG GQGEPAHPEY LVTLVVHTDT TEVLINESTD RATAGRVTVS ADYTLKKASD 
LSVMRIAHRQ SVALVDFPTQ EFAKLRAVRD AENRAARELA ELISADLASL LVRK