| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_4380 |
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| Symbol | |
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| ID | 7387954 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 3711920 |
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| End bp | 3712579 |
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| Gene Length | 660 bp |
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| Protein Length | 219 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 643653024 |
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| Product | hypothetical protein |
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| Protein accession | YP_002551195 |
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| Protein GI | 222150238 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0325] Predicted enzyme with a TIM-barrel fold |
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| TIGRFAM ID | [TIGR00044] pyridoxal phosphate enzyme, YggS family |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACCATTG AAGAACGACT GGATGAGGTA CGGACCCGGA TCGCTGCTGC GGCCCAAGAA
GCCGATCGGA CCCCGGAGGC GGTGACGCTG GTCGCCGTTT CCAAAACCTT CGATGCGGAG
GCGATCCGTC CGGTCATCCT GCATGGCCAG CGGGTGTTTG GTGAAAACCG GGTGCAGGAA
TCGCAGGGAA AATGGCCGGA GCTGAAAGCC GAAACACCTG AGATCGAGCT GCATTTGATC
GGACCGTTGC AATCCAACAA GGCAGCGGAA GCCGTGGCGC TGTTCGATGT GATTGAGACG
GTGGACCGGG AAAAAATCGC CCGCGCGCTG GCCGAGGAAA TGGCCAAGCA GGGCCGGCAG
CTGCGGCTTT ATGTGCAGGT CAATACCGGC TTGGAGCCGC AAAAGGCGGG TATTGCCCCG
CAGGAAACCA AGGCTTTTGT TGATCTTTGT CGCTCTGAAC TCGGTCTGGA GATCGAGGGC
TTGATGTGCA TTCCGCCTGC GGAGGAAAAT CCTGGTCCGC ATTTCGCTCT TCTGGCAAAA
CTTGCCGGGG AATGCGGCGT TTCGCGCTTG TCGATGGGCA TGTCCGGCGA TTACGAAACT
GCAATTGCTT TCGGCGCGAC CAGCGTGCGG GTTGGATCGG CGATTTTCGG CCATCGCTGA
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| Protein sequence | MTIEERLDEV RTRIAAAAQE ADRTPEAVTL VAVSKTFDAE AIRPVILHGQ RVFGENRVQE
SQGKWPELKA ETPEIELHLI GPLQSNKAAE AVALFDVIET VDREKIARAL AEEMAKQGRQ
LRLYVQVNTG LEPQKAGIAP QETKAFVDLC RSELGLEIEG LMCIPPAEEN PGPHFALLAK
LAGECGVSRL SMGMSGDYET AIAFGATSVR VGSAIFGHR
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