| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_4369 |
|---|
| Symbol | |
|---|
| ID | 7387945 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Agrobacterium vitis S4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011989 |
|---|
| Strand | + |
|---|
| Start bp | 3689700 |
|---|
| End bp | 3691022 |
|---|
| Gene Length | 1323 bp |
|---|
| Protein Length | 440 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 643653015 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002551186 |
|---|
| Protein GI | 222150229 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2270] Permeases of the major facilitator superfamily |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.486519 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTGTTCG ACTGGGCCGC CCAGCCCTTC TTCACCGTGG TCACAACCTT TATTTTCGGC
CCCTATTTCG TCTCCCGCTT CACCAGCGAT CCCGTCAGCG CGCAAGCCGC CTGGAGCAAT
GCCGCCACCG TCGCCTCCGT GGTCATCGCC CTGCTCTCCC CTGTGCTGGG TGCCATTGCC
GACCGTAGCG GCTCGCGCAA ACCGTGGATC GCCTTCTTTG CTGTCATCAA GATCACCTGT
CTGCTGCTGC TCTGGCAAGC CGTCCCCGGC TCACCGGTGA TTTTTCCGCT GGTGCTGTTC
AGCCTTGCCT CGATAGCTGC CGAATTCTCT ATCGTCTTCA ACGATTCGAT GATGCCAAGG
CTGGTGAGCG CCAAGGATGT CGGCCGGATT TCCAATATGG CCTGGGGGCT CGGCTACTTG
GGCGGGATGA TCGTGCTGAT TGCCGTCGTG CTGTTTGTTG CGGCCAATCC CGACACGGGC
AAGACCATTT TAGGCAGCAC GCCGCTGTTC GGGCTTGATC CGGCCACTGG TGAGGATGCC
CGCGTCACCG GGCCGGTCTC GGCGCTCTGG TATCTGCTGT TCATCCTGCC GATGTTCTTC
TTCACGCCCG ATCAACAGAA GGGCGATCCG TTTGGCAAGG CGGTGAAAGC CGGGCTTGCC
GACCTCAAGG CGACGCTGCG CGAGGTGCGG CACCGGGCGG GTATCCTCAG GTTTTTGATT
GCCCGGATGA TCTACCAGGA CGGCGTCAAC GGCTTGCTGA TCCTCGGCGG GGTGTTTGCC
GCTGGCATGT TCGGCTGGTC AACCATGGAA ATCGGTATTT ACGGCATTAT TCTCAATGTC
GTCGCCATTT TCGGCTGCGC CCTTGCAAGT CGGCTGGATG CGGCGCTTGG CTCGAAAACC
ATGGTGGTCA TCAGCCTGAT CCTGCTTTTG ACGGCCACCT TCGGCATTAT TTCCACTGGC
CCCAGCTTCA CCGCCTTCGG CCTGATACCG CTTTCGCCTG ATAGTACCGG CAGCCTGTTC
GGCACGGCGG CGGAGAAAGT CTATATTCTC TACGGCATCC TGATCGGCCT TGCCTTCGGC
CCGGTTCAGG CCTCGTCCCG CTCCTATCTC GCCCGCAGCA TCGCCCCTGA GGAAGCAGGC
CGTTATTTCG GCATCTATGC GCTGTCAGGC CGCGCCACAA GCTTTATGGC CACCTTGTCG
TTTTCGCTGA TCACCACCGC CACCGGTTCG TCGCGGGCGG GCATGGCGAG CTTGATTATC
TTTCTCGGCG TTGGGCTGGT GCTGCTGCTG GCAACGCCCT ACCCGGCAGC TAAGAGGAGC
TGA
|
|---|
| Protein sequence | MLFDWAAQPF FTVVTTFIFG PYFVSRFTSD PVSAQAAWSN AATVASVVIA LLSPVLGAIA
DRSGSRKPWI AFFAVIKITC LLLLWQAVPG SPVIFPLVLF SLASIAAEFS IVFNDSMMPR
LVSAKDVGRI SNMAWGLGYL GGMIVLIAVV LFVAANPDTG KTILGSTPLF GLDPATGEDA
RVTGPVSALW YLLFILPMFF FTPDQQKGDP FGKAVKAGLA DLKATLREVR HRAGILRFLI
ARMIYQDGVN GLLILGGVFA AGMFGWSTME IGIYGIILNV VAIFGCALAS RLDAALGSKT
MVVISLILLL TATFGIISTG PSFTAFGLIP LSPDSTGSLF GTAAEKVYIL YGILIGLAFG
PVQASSRSYL ARSIAPEEAG RYFGIYALSG RATSFMATLS FSLITTATGS SRAGMASLII
FLGVGLVLLL ATPYPAAKRS
|
|---|
| |