Gene Avi_4356 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_4356 
SymbolcitE 
ID7387933 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011989 
Strand
Start bp3671934 
End bp3672833 
Gene Length900 bp 
Protein Length299 aa 
Translation table11 
GC content59% 
IMG OID643653003 
Productcitrate lyase beta subunit 
Protein accessionYP_002551174 
Protein GI222150217 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2301] Citrate lyase beta subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGACCA ATCCGCCCAA TCGCAGGCCG CGTTTTCGTC GCTCGTTGAT CAGCGTTCCC 
GCTATCAACC TTCGTGCATT GGAAAAATCC CTGTCGCTGC CTTGCGATGG AATGATTTTC
GATCTGGAGG ATTCGGTTGC AGATGCTAGC AAGGCCGAGG CACGCGACAT CCTGCGGCGG
TTTTTGCAAC ACGCGGATTT GAACGGTCGT GAAGCCATTA TCCGCGTCAA TAGCAATGAT
ACTCTCTGGT TTGCCGAGGA TTTAGCCCTT GTCGAGGCGA TCAAGCCGGA TGCGGTGTTG
CTGCCCAAGG CTGAACGGGT GGAAGACCTG CACCGGCTTC GCAGTGCAGC CGGGGTGGGG
CCTGCCCTCT GGGCGATGAT CGAGACACCG AAGGCCGTCC TGGCGGCGGC GGAGCTTGCC
AGTGCGGGTG CGGCACTGGG GCTGGAATGC CTTGTGGTCG GGCTGAACGA CTTGCGCAAG
GAAACCCGGG TGCCACCGGG CCTTGGCCGT CAATATCTGG TTCCGTGGCT GATGCAGGTG
GTCTTGGCTG CCCGTGCTTA CGGACTTGAG GTTATCGATG CAGTTTCCAA TGATTTTCGC
GATCTTGACG GTTTTGCAGC CGAATGCAGC CAGGGCCGTT CGATGGGCTT TGATGGAAAG
ATGCTGATCC ACCCGGCCCA GATCGATGCG GCCAACCGGT ATTTCGGGCC ATCTGAATCC
GACATCGCCG AGGCGCGGGA GATTGTCGCG GCTTTTGCGG CGCCGGAGGC GGCGCATCTC
AATGTCATCA ATCTGGATGG CCGGATGATC GAGCGGCTGC ATGTCGCCGA AGCCGAGCAT
CTTCTGTCCA AGCTGTCTCT TCTTGAACCA CGACCATCAT CTTCAATCCA GAAAGGATGA
 
Protein sequence
MQTNPPNRRP RFRRSLISVP AINLRALEKS LSLPCDGMIF DLEDSVADAS KAEARDILRR 
FLQHADLNGR EAIIRVNSND TLWFAEDLAL VEAIKPDAVL LPKAERVEDL HRLRSAAGVG
PALWAMIETP KAVLAAAELA SAGAALGLEC LVVGLNDLRK ETRVPPGLGR QYLVPWLMQV
VLAARAYGLE VIDAVSNDFR DLDGFAAECS QGRSMGFDGK MLIHPAQIDA ANRYFGPSES
DIAEAREIVA AFAAPEAAHL NVINLDGRMI ERLHVAEAEH LLSKLSLLEP RPSSSIQKG