Gene Avi_4345 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_4345 
SymbolphbB 
ID7386579 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011989 
Strand
Start bp3662322 
End bp3663047 
Gene Length726 bp 
Protein Length241 aa 
Translation table11 
GC content57% 
IMG OID643652995 
Productacetoacetyl CoA reductase; poly-beta-hydroxybutyrate biosynthesis 
Protein accessionYP_002551166 
Protein GI222150209 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID[TIGR01829] acetoacetyl-CoA reductase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.322844 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCAGGG TAGCTTTGGT AACCGGCGGA ACACGTGGCA TCGGCGCAGC AATTTCAACG 
GCATTGAAGG CAGCTGGATA TACGGTTGCC GCCAATTATG CTGGCAATGA CGAGGCCGCA
AAGGCATTTG AAGCCGAAAC CGGCATTCCG GTCTTTAAAT GGGACGTCTC CTCCTACGAG
GCTTGCAAGC AGGGCATTGC TACCGTCGAG GCGGCCCTCG GGCCGGTTGA AATCCTGGTC
AACAACGCTG GCATTACCCG TGATGCCATG TTCCATAAAA TGACGCCTGA GCAGTGGAAC
GATGTGATCG GCACCAATCT GAGCGGTCTG TTCAATGTCA CCCACCCGGT CTGGACGGGC
ATGCGCGACC GCAGCTTTGG CCGCGTCATC AACATTTCCT CCATCAACGG CCAGAAGGGC
CAGATGGGCC AAGCCAATTA TTCTGCCGCC AAGGCTGGCG ATCTCGGCTT TACCAAGGCG
CTTGCCCAGG AAGGTGCGGC GAAGAATATT ACCGTTAACG CCATTTGCCC GGGCTATATC
GGCACGGAAA TGGTCCGGGC GATCCCGGAA AAAGTCTTGA ACGAGCGGAT CATTCCGCAA
ATTCCAGTCG GACGCCTCGG CGAACCGGAG GAAATTGCCC GTATCGTGGT GTTTCTCGCG
TCCGATGACG CCGGTTTCAT CACCGGCTCA ACGATTTCCG CCAATGGTGG CCAATTCTTC
GTCTGA
 
Protein sequence
MSRVALVTGG TRGIGAAIST ALKAAGYTVA ANYAGNDEAA KAFEAETGIP VFKWDVSSYE 
ACKQGIATVE AALGPVEILV NNAGITRDAM FHKMTPEQWN DVIGTNLSGL FNVTHPVWTG
MRDRSFGRVI NISSINGQKG QMGQANYSAA KAGDLGFTKA LAQEGAAKNI TVNAICPGYI
GTEMVRAIPE KVLNERIIPQ IPVGRLGEPE EIARIVVFLA SDDAGFITGS TISANGGQFF
V