Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_4345 |
Symbol | phbB |
ID | 7386579 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011989 |
Strand | + |
Start bp | 3662322 |
End bp | 3663047 |
Gene Length | 726 bp |
Protein Length | 241 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 643652995 |
Product | acetoacetyl CoA reductase; poly-beta-hydroxybutyrate biosynthesis |
Protein accession | YP_002551166 |
Protein GI | 222150209 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | [TIGR01829] acetoacetyl-CoA reductase |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.322844 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCAGGG TAGCTTTGGT AACCGGCGGA ACACGTGGCA TCGGCGCAGC AATTTCAACG GCATTGAAGG CAGCTGGATA TACGGTTGCC GCCAATTATG CTGGCAATGA CGAGGCCGCA AAGGCATTTG AAGCCGAAAC CGGCATTCCG GTCTTTAAAT GGGACGTCTC CTCCTACGAG GCTTGCAAGC AGGGCATTGC TACCGTCGAG GCGGCCCTCG GGCCGGTTGA AATCCTGGTC AACAACGCTG GCATTACCCG TGATGCCATG TTCCATAAAA TGACGCCTGA GCAGTGGAAC GATGTGATCG GCACCAATCT GAGCGGTCTG TTCAATGTCA CCCACCCGGT CTGGACGGGC ATGCGCGACC GCAGCTTTGG CCGCGTCATC AACATTTCCT CCATCAACGG CCAGAAGGGC CAGATGGGCC AAGCCAATTA TTCTGCCGCC AAGGCTGGCG ATCTCGGCTT TACCAAGGCG CTTGCCCAGG AAGGTGCGGC GAAGAATATT ACCGTTAACG CCATTTGCCC GGGCTATATC GGCACGGAAA TGGTCCGGGC GATCCCGGAA AAAGTCTTGA ACGAGCGGAT CATTCCGCAA ATTCCAGTCG GACGCCTCGG CGAACCGGAG GAAATTGCCC GTATCGTGGT GTTTCTCGCG TCCGATGACG CCGGTTTCAT CACCGGCTCA ACGATTTCCG CCAATGGTGG CCAATTCTTC GTCTGA
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Protein sequence | MSRVALVTGG TRGIGAAIST ALKAAGYTVA ANYAGNDEAA KAFEAETGIP VFKWDVSSYE ACKQGIATVE AALGPVEILV NNAGITRDAM FHKMTPEQWN DVIGTNLSGL FNVTHPVWTG MRDRSFGRVI NISSINGQKG QMGQANYSAA KAGDLGFTKA LAQEGAAKNI TVNAICPGYI GTEMVRAIPE KVLNERIIPQ IPVGRLGEPE EIARIVVFLA SDDAGFITGS TISANGGQFF V
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