| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_4336 |
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| Symbol | rhtB |
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| ID | 7386572 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 3656124 |
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| End bp | 3656762 |
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| Gene Length | 639 bp |
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| Protein Length | 212 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 643652988 |
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| Product | RhtB family transporter |
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| Protein accession | YP_002551159 |
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| Protein GI | 222150202 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1280] Putative threonine efflux protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGATTGCCG ATCATTTTGC GCCGTTTTTC TCCGCCTATC TCGTCTATCT GGTGGCGGTG
ATCAGTCCCG GCCCGGCCAA TATGGCGATT ATCTCGACGG CCATATCGCA AGGGCGCCGG
TCGGGTCTGG TAATTGCGCT TGGCATATTT GCAGGTTCTT TTACCTGGGC CATGGCTGCG
TCCTTTGGCC TTGCCGCGTT GCTGCATCAT TACGGCCAGG CCCTCATCCT GTTGAAAATC
GCCGGCGGGC TTTATCTTTT CTATCTCGCC ATCAAGGCCG GAGTGTCTGC CTTGCGAAAA
CAACAGCCTG CCGGGGAGCA GGTCGAGGCG GTCAAGCGGG ACCGTTATGG GTCAATCTTT
CTGCGTGGCT ATCTCATTCA CTTGACCAAT CCAAAAGCGA TTTTCGGTTG GCTGGCGATT
ATTTCTCTAG GCGTGCCAGT GGATGCCTCA CTGGGGTCCG TGGTGCTCGT GGTCGGTGGA
TGTCTGGTGA CCGGGTTTTC AGTCTTCTGC GGCTATGCTC TGGTGTTTTC GACCGCCCGG
GCCGTGCATG TCTATCGGGC CAGCAGGCGC TATGTGGATG GCGTTCTGGC GCTTCTGTTC
GGTGCGGCGG GCGTGAAAAT GCTAACAACC AGCTTGTGA
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| Protein sequence | MIADHFAPFF SAYLVYLVAV ISPGPANMAI ISTAISQGRR SGLVIALGIF AGSFTWAMAA
SFGLAALLHH YGQALILLKI AGGLYLFYLA IKAGVSALRK QQPAGEQVEA VKRDRYGSIF
LRGYLIHLTN PKAIFGWLAI ISLGVPVDAS LGSVVLVVGG CLVTGFSVFC GYALVFSTAR
AVHVYRASRR YVDGVLALLF GAAGVKMLTT SL
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