| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_4331 |
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| Symbol | |
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| ID | 7386569 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 3652769 |
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| End bp | 3653923 |
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| Gene Length | 1155 bp |
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| Protein Length | 384 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 643652985 |
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| Product | MFS permease |
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| Protein accession | YP_002551156 |
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| Protein GI | 222150199 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.611947 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGCAAG GATTTTTCAC CAGGGAACGT CTGGCCGTTT CACTTCTGTT CCTGATGAAC
GGCTTCATTA TCGGCTCATG GGCGCCCAAA GTGCCTGAAT TTGCCCGCAA TCTCGACCTG
AGCGAAGCGC AGCTTGGTCT GATGATCCTC GTTCTGGGGC TCGGCTCGCT CGCCTGCATG
CCGGTGGCTG GTGCCCAGAT CGCCCGCTAC GGCTCACGCC GGGTCACGCT CGCCTGCGCG
CTGATATTTC TACCCACGCT GCTCCTGCTG ACGGTTGCGC CCAATATTCC CTTGGCGGCC
CTGGCGATTT TCCTGTTTGG CGGCTTCATG GGCGCCATGG ATGTGGCGAT GAATGCCAAT
GCGGTCGAGA CAGAAAGACA GATGGGGCGC TCGATCATGT CGTCCTGCCA TGCCTTCTGG
AGCCTCGGCG GCCTGATTGG CGCCAGCATA GGCGGACCGC TGCTGGCCAT GGCCGGATCG
ACGGTGCATA GCCTTGTCGC CACGGTCCTC GCCGCCCTGA TGCTGTTTGC TGCCTGGCCG
ATCACCCTTC GCGACCAGCC CCATCCCGAT GCCGAGCATC GCAGGGCGCG CCTGCCGATG
ACGCCGCTGC CCTGGCTTCT CGGCCTCGTC GCACTGTTTT GCATGATCCC GGAAGGTGCG
GTGCTCGACT GGGGTGCTTT TTATCTGCGC AATGAACTGG GCGGCTCCAT TGCCACCTCA
AGCTATGCCT ATGCCGGCTT CTCCTTGACC ATGGCGATCA TGCGCTTTGC CGGCGACATC
GTCCGCGACC GGCTGGGGGC GGTGACAACC ATGCGGATTT GCGCCCTGAT CGCCATGATC
GGCACGGCCA TTTCCGGCTT TGCTGCCGAT CCATGGACCG CCGTCATCGG CTTTGCCATC
ATGGGTATCG GCATTTCCAA CCTGGTTCCC ATCGCCTTTT CCGCCGCTGG CAACCTGCCG
GGCATGGCGC CGGGCGTCGG CCTGTCGGTG GTCAGCGCCA TGGGCTATTC GGGTATTCTG
GTGGCCCCAT CGCTGATCGG TTTCGTCGCC GAGCATACGT CACTGGCGCT GGTGTTTCGC
GTGCTCCCAG TGCTGATTCT GGTTGCCTTG CTGCTCTCCG GCCTTGCCCG GCATGCCGAC
CGGCCCCAAG TTTGA
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| Protein sequence | MQQGFFTRER LAVSLLFLMN GFIIGSWAPK VPEFARNLDL SEAQLGLMIL VLGLGSLACM
PVAGAQIARY GSRRVTLACA LIFLPTLLLL TVAPNIPLAA LAIFLFGGFM GAMDVAMNAN
AVETERQMGR SIMSSCHAFW SLGGLIGASI GGPLLAMAGS TVHSLVATVL AALMLFAAWP
ITLRDQPHPD AEHRRARLPM TPLPWLLGLV ALFCMIPEGA VLDWGAFYLR NELGGSIATS
SYAYAGFSLT MAIMRFAGDI VRDRLGAVTT MRICALIAMI GTAISGFAAD PWTAVIGFAI
MGIGISNLVP IAFSAAGNLP GMAPGVGLSV VSAMGYSGIL VAPSLIGFVA EHTSLALVFR
VLPVLILVAL LLSGLARHAD RPQV
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