Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_4330 |
Symbol | |
ID | 7386568 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011989 |
Strand | - |
Start bp | 3644668 |
End bp | 3652239 |
Gene Length | 7572 bp |
Protein Length | 2523 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 643652984 |
Product | polyketide synthetase protein |
Protein accession | YP_002551155 |
Protein GI | 222150198 |
COG category | [C] Energy production and conversion [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG0604] NADPH:quinone reductase and related Zn-dependent oxidoreductases [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [COG3321] Polyketide synthase modules and related proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACAGTAG AGATTATAGG GCGTGCCTGC GTGGCACCGG GGGCAAGATC TCCCGAAGAG TTGTTTGATC TTTTGCGTGC CGGCGCATGC ACTGTCTCGA CCTTGCCCGG GGATCGTTGG GATATTGCGC GCTACTGGCA TCCCGAAATC GGCACGCCTG GAAAATATTA CACCTTCGCT GCCGGTGTGA TGGATGGAAT CTATCAGTTC GATCCCGCCC TGTTTGGCAT GTCACGGCGC GAGGCGGCTT TTATGGACCC GCAGCAGCGC ATCCTGCTGG AATTGACCTG GCGGGCGCTG GAAGACGCCA ATATCCCCGC TAACAGTTTG GCTGGCCAGA ATGTCGCGGT CTATGTCGGC GCCTCCAGTT TCGACCATGC CAATCTGGCG GCGGAAGATC CGGCTGGTCC CGGTCCGCAT TTCATGACCG GCAATACGCT CTCGGTGGTC TCCAACCGTA TCTCGCATGT CTTCGGCCTG AATGGTCCGA GCATGACGGT CGATACGGCC TGTTCGTCAT CGCTGGTCGC ACTCGATCAC GCGGTGCGCG CGATTGCGTC TGGCGAGGTT GACACCGCCA TTGTTGCCGG TGTCAACGTG CTGGTCCATC CCCTGCCTTT CGTCGGCTTC GCGCAGGCGC GGATGCTGTC GATAGACGGT TTGTGCAAGG CCTATGCCAA TGACGGTATT GGCTATGTTC GCGCCGAAGG CGGTGCCGTG CTGGTGCTGC GCTCTAGCGA TAAGGCCCGG CGCGAAGGCG ACCGCAGCCA CGCGACTATT GTTGCCAGCG GCACCAATGC GGCCGGGCGC ACCAACGGCA TTTCGCTGCC GTCGCGTGAG GCGCAGGCCG TTCTGCTGCA TGCCGTCTAT GACGGCAATG GTCTCGACCC GGATCGGCTG GCCTTTATCG AAGGGCATGG CACCGGCACC AAGGTCGGCG ATCCCGCGGA AGTCTGGTCG CTTGGCACGG TCATCGGCCA GCGCCGCAAG GAACCGGTGT GGATCGGCTC GATTAAGACC AATATCGGCC ACGCCGAACC CGCATCCGGC CTGCTTGGCG TGATGAAAGC GATGATGGCC TTGCAGCACG ACCTGCTGCC AGCCTCGCTG CATTTCAACG AGCCAAATGA CACAATTGAT TTCGATGGAC TGAACGTCCG GGTTGCCTCG CAGGCCGTTG CACTGGCACG CGATGGTGCG CCGCGCCTTG CCGGGATCAA TTCCTTTGGC TTTGGCGGCG CCAATGCGCA TGTGGTGATT GCCGATCCGC AGAGACCTGA TTTGGCGCAA GACGCGGCTA ATCCAGCCGG TGCCGGTCGC TTGTTCATGG CCAGCGCCCA TTCTCAGGAA AGCCTGAAAG CGTTGCTGGA CAGTTACGAC AAGGCCTTTG CGGCAGCTGG CAGCGATGGT GATCTGGAAG ACCTGATCTC GGCGGCCGCC TCCAACCGTG CGCCGCTCCG GCACCGCTTC GTTGCCAGTG GCAGCGCGGA TGCCATCGTC AAGGCGGTGC AGGAACGGCT TGCCACAGCG AAGACCGGCG GCGAAATCGG TGAAGCCTCG TCGCGCAACG GTAAGCTCGC GTTTGTGTTT TCTGGCAATG GCGCTCAATG GGCGGGCATG GGCCTCGATG CTTACCGGGC AAATGCCCGA TTCCGCGAGA GCTATGAGCG GATCGCCGCG CTGTTTACGG CGCATTCGGA CCTTGACCTC GTTGCGGCAC TGACCGATCC GGATCTGGAA GCCCGATTGA AAGATACCAG GCTTGCCCAG CCCATGCTGT TTGCCATCCA GGCCTCGCTG TCGGATGCGC TGCAACTTGC CGGTCTGGTG CCGGATGCTG TTTACGGTCA TTCGGTCGGT GAAGTTGCTG CCGCCTATGT ATCGGGTGCG CTGTCGCTGA AGGATGCCGT CTGTGTGATC GCCAAACGGT CGCAGCATCA GGCGGTGTTG GCCGGTGAAG GCACGATGGC GGCCCTGAAA CTTGGCGAGG CCGATGCGCG CGCCATGCTG GCCGAGCTTG GCTTTGATGA CCTGACGATT GCCGCGATCA ATGCACCCAA TTCGGTGACC GTGTCTGGTC GTGAAGACGC GGTCCGGGCG CTGAGAGAAC ATGCCCGCAA GCAGCGGGTG CCAGCCCAGG TGCTGGACAT TGATTATCCC TTCCATCATC CGCTGATCGA TAAGGCGCAG GCTGCTTTTT CGGCCGATCC GCCGCTGATT ACCCCGCGCC AGACCGCCCT TCCATTCATC TCCACGGTGA CGGGCGAGCA ACTGGAGGGC ACCGCGCTGA CCTCGGATTA CTGGTGGAAG AATGTCCGCC AGCCGGTGCA GTTCCAAGGG GCGACGGAAG CGGCCATCGC GCTTGGTTGC AGTGTATTCG TTGAAATTTC TCCGCGTGCG ATCCTTGGCG GCTATGTGTC GGAAACGGCG CAGCATGTGT CTTCGACGGT TGCCGTCAGT GCCAGCCTTA GCCGTGAGGC TCTGGATGAG ACGGTTGATC CGGTGGCGCG GGCTTTGGCG CGCGCTGTCG CCAGTGGCGC CAAGGTGGAT GAGGCTAAGG TCTTCGGTCC GCGCCGCGCC GATATCGTCC TGCCGGGCGT GCCTTTCGAG CGGGCGGATC TGCGGCCGGA GCCGACCAGC GACCGCGTCG ATCTCTATGG CCGGTTCGGC CAGACGGCCT ATCGGTTAAG CGGCTGGCGA GTCGATTTGA ATGGCGGGCA TTGGAAAAAC CATCTCGACG CGCATCTGTT TCCGGATCTG GCGGAACATG TGGTCGATGG CCGCGCTATT TTGCCGGGCA GTGGTTTTGT GGAAATTGCC ATTTCGGCGG CGCAGGCGCA TTTCGGCTCC GACCAGCTGG AGATCAGCAA TGTCGAGATC ATGCGACCGC TGGAATTGAG CGACAGCCGG ATCATCGAAC TTTCCACGCT GATTTCCGCC GCGACCGGCG ATCTCCAGAT CCGCTCCCGT GAGCGGCTGA GCGATGACGA CTGGACGGTG AATGCGGTTG CCCGGGTTCG CAAGCTCACG GCCTCCGAAT TGGACGATGC CGTGGATTTC GACCTGTCCA GCCCGACATC GGAGCTGGAT AAATCTGCCG CCTACCGGAC GGCGCGCAAT TTCGGCCTGG ATTACGGGCC GCGCTTCCAA TTGCTGGAAA AGGCGATCTG CCATGGCGAG CGGCTTGTCG AAGTGTTCCT GAAGCCGGCA GCCGCGCCGG GCCACCCGTT GCTGCGCTAT AATCTCAACC CAATGTCGGT TGATGCGATG TTCCACGGGT TGGTGGCGCT GTTTGGCCGC TTCAGCGGCG AACAGGGCGG AGCGCCTTAT ATTCCCGTGC GTTTCGGACG CGTCCGCACG CGGGTTCTCG GTAGCCCGGT CCATCGGGCG GTGATCGAGA TCGAACGGAT CAGTGATAGT TCGATCAAAG CCAATTTTCA TCTCTATGGT GAGACGGGCG AGCGGATCGC CAGCTTGAGC GATAGCCGGT TCCGACGCAC CTATCTGAAA CAGCATAAGA CGCTTGACGG ACTTGCCTAT CATTATGAAA CCATTGCCCT ACCCCTGGTG AAAGATCAGG GTGTGGCCCT GGTTGCACCG TTGGGCGATG TTTTCGCCTG TCAGGAGCGT GAGCTGGACA ATGCCACGGT GCTGATCCAG GCCTGCGTGC TCAGCGCCTT CTATGCGCTG GCCGAGCGCC TTGCCGGTCA AGATCGGCGC GTGTCGCTGG TCGATCTGCC GGGCGATGTG CGGTTGCGGC GGTTCCTGAC CAATGCCCTG CACAGTCTGA CCGATAGCGG CTTTGCCCAG TATGCGGATG GCAGCTGGAT GCTTGAAGAT GGCAGCGATC TTCCGCCCGC TTTCGAGCTG ATCCGGGAAC TCTATCGGGA TTTCCCGGAA CGCACCGTTG AACTGGTGAT GATCAATGAC GTGCTGACAG CCGTTAATGC ATCGCTCGAT CAACCTGCAG GTGTTGTGGA GGCGGTTCCG GATTGGGACG GGGTGATCAG CGAAGCGACG CTGGACCATT TCGCCGTTCA TTCCACGCTC GCCACCGAGA GTCATAGGGT GTTGTTGAAG GCGGTGGTCG ACTGTCTCTC GACGCTGGAT GCCGATGCGC CGCCGCTGGT GGTCGAGCTT GGCGCCAGCT CGCTTCATCT CAGCCGCAAG CTCGCCGATC TGGTTCGTGC GGCTGGCGGC AATCTGGTGA TTTACGAGCC TGAGGCAGGC CTGCGCCGTA ATCTGGAACT GTCTTTCGAG GCTGATCCGC GCGTCACTGT CGTGGACGCA AAGGGATTGG ACCAACTTTC TCTGCTGAAA GCGCCGGTCG ATCTAATTGC CAGCGCCCAT GCCGATCTTT GCCGCTTGCT GGATGGTGAA ATGCTGGCAC GGCTCAGTCA TGGCGCCTTG GCCTCGGCCC GTCGCCTTGT CGCCGTGCAA CCAGCGCCCG GCTTGTTGCA TGATTTCGCC TTCGGTCTAC TAGATGGCTG GTTCGACAGG ACGGTTTCGG AGGAATTTCC GCTCGGCCGA TTTGGCGGTA GCGAAGACTG GATGAAATCC CTGCAACAGG CCGGTTTTGC TGCGGCCCAT GCCCGGCAAT TGCAGGTGGA TGGCGGTAGC CTTATCGTGG CGGAAGCCCA GGGCCGGGCT GACGTGGCTG AGCCATATGA TGCGACGCGT CAGGACGGTG GATCGGTGGA CGAGGTTGTG GCCAGCGGGC CGGTGATCAT CGTTCATGAA AAAACTGCGG ATCTTGCCCG GCTTTTGGCG GCAGCAAGAG CGCTTGGTGG TTCCCAGGTG TCTTTGCTGT GTCTGTCAGG CAGCTTTGAA ACGGACAGGT CGATGCTGGC CGACGCACTG GGCAAGGCTG GATCAGCCTT GGGCGGAATG GTCTGGCTGA TGCCGGATAC CGATGCGGCT GCGGATGGAT CGCTGCTGTT GCAGGACCGG GTCGGCGCTC TTAGTGCGCT GGCCATGGCG CTTGGCGATG TTGCGGCATC AGCGTCTGAT GCTGTGAGGG CGCTTCCGGT CACTCTGGTT CTGCCCGGCG GTGCGCCCGT CACCGGCATG ACCGGCAAGG ACTTGACCCG CTCCAGTCAC GCCGGGCCTG TCAATGCAGG CCTTTGGGCC TTTGCCCGTG TGTTGCGCAA TGAGTTCGAT CTTTTCGACA TGCAGGTCGT CGATACCGGC CCCTCCAGCA ATACGCTGGA AATCATGCTG GACTGGGGCA TGCGCCTGCT GGCCGCCAAG GGCGACAACC GCGAATGGCT GGTGGAGCCG GAAACCGGGC GGATGGCTGA GATTCGTGCC GTGCCTGGTC CTGCCTCGCT GACGGCGCAG CGTACGGATG CTTTTGAGGC GGCAGTCATT CGCCAGCAGG TGCCGTCGCA GGTCGCCAGC ATTCGCTGGG AAAGCTGCCC GGTCCCAGTC ATCGGCCCGA CCGAAGTGCT GGTAAAGACC GCAGCGACAG GCTTGAATTT CCGCGACGTG ATGTGGGCCA TGGGCCTGCT GCCGGAAGAA GCGCTTGAGG ACGGCTTTGC CGGGGCCTCT ATCGGCATGG AATTTGCCGG TGAGGTGGTC GCTGTGGGCG CCAAGGTGAG CGATCTTGCC CTCGGCGACA AGGTGATGGC AATCGCCGCT GCGGCTTTCG GCACCCATGT CAAGGTTGAG CGGGCTGGCG TGGCGAAGCT GCCGGATGGC GTGGACCCGG TATCGGCGGC GACCATTCCG GTGGTCTTCC TGACCGCCTA TTATGCCATC CATGAGCTTG GGCGGGTGCG CCCGGGCGAA ACCATCCTCA TTCACGGTGC CGCTGGCGGC GTTGGGCTTG CAGCCTTGCA GGTCGCCCGG CATTTCGGTG CCAAGATCAT TGCCACGGCT GGCACAGAAG AAAAGCGGCG TTTCCTGGAA ACGCTGGGGG CGGACCATGT GTTCGACAGC CGCTCGCTCG GTTTTGTCGG CGATGTGCTT GACGTGACCG GCGGCGAAGG TGTCGATCTG GTGTTGAACT CGCTGTTTGG CGAGGCGATG GAAAAATCCC TGTCGCTGGT TAAGCCGTTC GGGCGTTTCC TTGAGCTTGG CAAGCGCGAT TATTACGCCG ACAGCAAGAT CGGCCTGCGG CCATTCCGTC GCAATGTCAG CTATTTCGGC ATCGACGCCG ACCAATTGCT GGTCCTGCAT CCCGATCTGT CGCGCCGCAT GCTGGCCGAA ATCGGTGGCC TGTTCGAGCA GGGCGTGTTC ACGCCGCTGC CGTTCCGTGC CTTTGAACAC GATGAGATCG GCGATGCCTT CCGCCTGATG CAGAATGCCG GCCATATCGG CAAGATCGTC GTGCTGCCGC CGGTTGCGGG TCGTGACCGC GTGGCGGTAA AGTCGGCACG CCGGATGGTG GTTGATGCGG ATGGCATGCA TCTGGTGGTC GGCGGTATCG GCGGTTTCGG CCTTGCCGCC GCCGATTGGC TGGTAGAGCA GGGCGCGCGC CATATCGCCT TATCGACGCG GCGCGGGCTG GTTGATGCGG AGACGCAAAC CGTGGTTGAC CGCTGGGCCA AGCAGGGCGT AACGGCCTAT ATTCGTGGCT GTGATGTTAC CAGCGAAGCT GCCTTGTCGG CGCTTTTGAC TGAGCTGCGC ACTATTGCGC CGTTGAAGAC CGTTATCCAT GCGGCGATGG TGCTGGATGA TGCCTTCATC TCCAACCTGA CGCGCGTGCG CAACCAGCCG GTCATCGACG TCAAGGCCAA GGGTGCAGCC CTTCTGGACC GGTTGACCCG GCAGGACGGG ATCGACAATT TCATTCTGTT TTCCTCGATC ACCACCTATG TCGGCAATCC CGGCCAGGGC AATTATGTCG CCGCCAACGG CTTCCTGGAA GGTTTGGCGC GGGCGCGTCG CGCCGAGGGG CTGGCTGGTC TTGCCGTCGG CTTCGGAGCA ATCGGCGATG CCGGTTATCT GGCCCGTAAT GCGCAGGTTA ATGAACGGCT TGGACGACGG ATCGGAAAGA CGGCGCTGGA TGCCCGCGAT GCGCTGTCGG CGGTCGGGCG CTATATCAGC GCCGATACCG GCTCCGTCGA TGCGGCTGTG GTGATGATTT CCGAATTCGA CTGGGCTGCT GCGCATTCGC TTGCCGTGGT CAACGAACCC TTGTTTTCGC TGATCATGCG CCGCAGTAAC CAGCATGTTG GCAGCGGTGA GGGTGGCGAG ATTGATCTGG TGGCGCTGAT TGATGGCAAG GCGCCAGCTG CGGCTCAGGA GGTGCTGTTT ACGGTGCTTG CCGGTGAAAT TGCCGATACG CTGCGGGTGC CCAAGGAAAG CATCGGGCTG AACAGCGTGC TGAAGGATAT CGGGCTGGAC AGTTTGATGG CTGTCGAGCT GGGGATGAAT TTCGAGCAGA ATACCGGCTT TGACATTCCT CTCAGCAGCC TTGCCGACAA CGCCACTGTC GGGGACCTGA CGCGCCGCCT CTATGAAAAA GTCAGTCTGC GCGGGCGGAC GGGCGATAAG GATGAGGCGA CGCCTGAGGA CAGCAAGATC ATGGACGATC TGCATCGCCG CCACACTGGG CAGACCCAGT AA
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Protein sequence | MTVEIIGRAC VAPGARSPEE LFDLLRAGAC TVSTLPGDRW DIARYWHPEI GTPGKYYTFA AGVMDGIYQF DPALFGMSRR EAAFMDPQQR ILLELTWRAL EDANIPANSL AGQNVAVYVG ASSFDHANLA AEDPAGPGPH FMTGNTLSVV SNRISHVFGL NGPSMTVDTA CSSSLVALDH AVRAIASGEV DTAIVAGVNV LVHPLPFVGF AQARMLSIDG LCKAYANDGI GYVRAEGGAV LVLRSSDKAR REGDRSHATI VASGTNAAGR TNGISLPSRE AQAVLLHAVY DGNGLDPDRL AFIEGHGTGT KVGDPAEVWS LGTVIGQRRK EPVWIGSIKT NIGHAEPASG LLGVMKAMMA LQHDLLPASL HFNEPNDTID FDGLNVRVAS QAVALARDGA PRLAGINSFG FGGANAHVVI ADPQRPDLAQ DAANPAGAGR LFMASAHSQE SLKALLDSYD KAFAAAGSDG DLEDLISAAA SNRAPLRHRF VASGSADAIV KAVQERLATA KTGGEIGEAS SRNGKLAFVF SGNGAQWAGM GLDAYRANAR FRESYERIAA LFTAHSDLDL VAALTDPDLE ARLKDTRLAQ PMLFAIQASL SDALQLAGLV PDAVYGHSVG EVAAAYVSGA LSLKDAVCVI AKRSQHQAVL AGEGTMAALK LGEADARAML AELGFDDLTI AAINAPNSVT VSGREDAVRA LREHARKQRV PAQVLDIDYP FHHPLIDKAQ AAFSADPPLI TPRQTALPFI STVTGEQLEG TALTSDYWWK NVRQPVQFQG ATEAAIALGC SVFVEISPRA ILGGYVSETA QHVSSTVAVS ASLSREALDE TVDPVARALA RAVASGAKVD EAKVFGPRRA DIVLPGVPFE RADLRPEPTS DRVDLYGRFG QTAYRLSGWR VDLNGGHWKN HLDAHLFPDL AEHVVDGRAI LPGSGFVEIA ISAAQAHFGS DQLEISNVEI MRPLELSDSR IIELSTLISA ATGDLQIRSR ERLSDDDWTV NAVARVRKLT ASELDDAVDF DLSSPTSELD KSAAYRTARN FGLDYGPRFQ LLEKAICHGE RLVEVFLKPA AAPGHPLLRY NLNPMSVDAM FHGLVALFGR FSGEQGGAPY IPVRFGRVRT RVLGSPVHRA VIEIERISDS SIKANFHLYG ETGERIASLS DSRFRRTYLK QHKTLDGLAY HYETIALPLV KDQGVALVAP LGDVFACQER ELDNATVLIQ ACVLSAFYAL AERLAGQDRR VSLVDLPGDV RLRRFLTNAL HSLTDSGFAQ YADGSWMLED GSDLPPAFEL IRELYRDFPE RTVELVMIND VLTAVNASLD QPAGVVEAVP DWDGVISEAT LDHFAVHSTL ATESHRVLLK AVVDCLSTLD ADAPPLVVEL GASSLHLSRK LADLVRAAGG NLVIYEPEAG LRRNLELSFE ADPRVTVVDA KGLDQLSLLK APVDLIASAH ADLCRLLDGE MLARLSHGAL ASARRLVAVQ PAPGLLHDFA FGLLDGWFDR TVSEEFPLGR FGGSEDWMKS LQQAGFAAAH ARQLQVDGGS LIVAEAQGRA DVAEPYDATR QDGGSVDEVV ASGPVIIVHE KTADLARLLA AARALGGSQV SLLCLSGSFE TDRSMLADAL GKAGSALGGM VWLMPDTDAA ADGSLLLQDR VGALSALAMA LGDVAASASD AVRALPVTLV LPGGAPVTGM TGKDLTRSSH AGPVNAGLWA FARVLRNEFD LFDMQVVDTG PSSNTLEIML DWGMRLLAAK GDNREWLVEP ETGRMAEIRA VPGPASLTAQ RTDAFEAAVI RQQVPSQVAS IRWESCPVPV IGPTEVLVKT AATGLNFRDV MWAMGLLPEE ALEDGFAGAS IGMEFAGEVV AVGAKVSDLA LGDKVMAIAA AAFGTHVKVE RAGVAKLPDG VDPVSAATIP VVFLTAYYAI HELGRVRPGE TILIHGAAGG VGLAALQVAR HFGAKIIATA GTEEKRRFLE TLGADHVFDS RSLGFVGDVL DVTGGEGVDL VLNSLFGEAM EKSLSLVKPF GRFLELGKRD YYADSKIGLR PFRRNVSYFG IDADQLLVLH PDLSRRMLAE IGGLFEQGVF TPLPFRAFEH DEIGDAFRLM QNAGHIGKIV VLPPVAGRDR VAVKSARRMV VDADGMHLVV GGIGGFGLAA ADWLVEQGAR HIALSTRRGL VDAETQTVVD RWAKQGVTAY IRGCDVTSEA ALSALLTELR TIAPLKTVIH AAMVLDDAFI SNLTRVRNQP VIDVKAKGAA LLDRLTRQDG IDNFILFSSI TTYVGNPGQG NYVAANGFLE GLARARRAEG LAGLAVGFGA IGDAGYLARN AQVNERLGRR IGKTALDARD ALSAVGRYIS ADTGSVDAAV VMISEFDWAA AHSLAVVNEP LFSLIMRRSN QHVGSGEGGE IDLVALIDGK APAAAQEVLF TVLAGEIADT LRVPKESIGL NSVLKDIGLD SLMAVELGMN FEQNTGFDIP LSSLADNATV GDLTRRLYEK VSLRGRTGDK DEATPEDSKI MDDLHRRHTG QTQ
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