| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_4292 |
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| Symbol | purH |
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| ID | 7386535 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 3606692 |
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| End bp | 3608251 |
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| Gene Length | 1560 bp |
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| Protein Length | 519 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 643652951 |
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| Product | bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase |
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| Protein accession | YP_002551122 |
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| Protein GI | 222150165 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0138] AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful) |
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| TIGRFAM ID | [TIGR00355] phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | CTGCTGTCGG TGTTCGACAA GAGCGGCATT GTCGATCTTG CCCGGGCCTT GAACGATATG
GGTGTGCGGC TGCTATCAAC CGGCGGCACC TACAAGGCGC TGATCGAGGC AGGCCTGCCC
GCCACCGACG TGTCAGACGT GACCGGCTTT CCGGAAATCA TGGATGGTCG GGTGAAGACC
CTGCATCCTG CCGTGCATGG CGGCCTGCTT GCCATCCGCG ATGATGAAGA CCATGTGAAG
GCTATGCAGG CCCATAAGAT CGAGGCCATC GATCTCGCCG TCATCAATCT TTATCCGTTT
GAGGCGGTTC TGGCAGCGGG CGGCGACTAT CCGACCACGG TCGAAAATAT CGATATCGGC
GGCCCGGCGA TGATCCGTGC CTCTGCCAAG AACCACGCCT ATGTTACCGT GGTGACTGAC
CCTGCCGATT ACGCCCAGCT TCTGGACGCG CTGAAAGCGG ACGATTGTCA CACGCCTTAT
GCGCTGCGCC AGCAGTTCGC CGCCCGCGCC TATGCCCGGA CCGCCGCTTA TGACGCAACG
ATCTCCAACT GGTTTGCCGA GGCGCTTGCC ATCGAGACGC CGCGCAACCG GGTGATTGGC
GGCAGCCTGC GCGAAGAAAT GCGCTATGGC GAGAACCCGC ACCAGAAAGC AGGCTTCTAC
GTCAATGGCG ATCAGCGTCC CGGGGTCGCA ACCGCCACGC TTTTGCAGGG CAAGCAGCTT
TCCTATAACA ATATCAATGA TACGGATGCC GCCTTCGAAC TGGTGTCGGA ATTCCTGCCT
GAAAACGGTC CGGCCTGCGC CATTATCAAG CACGCCAATC CATGCGGTGT CGCGGTCGGT
AAGACGCTGG CCGATGCCTA TCGCCGGGCA CTGGCCTGCG ACAGCGTCTC GGCTTTCGGC
GGCATTATCG CGCTGAACCA GACCCTGGAT GCGGAAACCG CTGAAGAGAT CGTCAAGCTG
TTTACCGAGG TGATCATCGC CCCTGACGTC ACGGAAGAGG CAAAGGCCAT TATTGCCCGC
AAGGCCAATC TGCGGCTGTT GACCACTGGC GGTCTGGCCG ACCCACGCGC GCCTGGCCTG
ACGGCCAAAA CGGTATCGGG TGGCCTGCTG GTGCAAAGCC GCGACAATCT GGTGGTAGAA
GATCTGGACC TGAAGGTCGT CACCAAGCGC GCACCGACCG CAGCCGAGCT GGAAGACATG
AAGCTGGCCT TTAAGATCGC CAAGCATGTG AAATCCAACG CTGTCATCTA TGCCAAGGAC
GGCCAGGCTG TCGGCATTGG CGCGGGCCAG ATGAGCCGGG TGGATTCCGC CCGGATCGCC
GCGATGAAAG CCGAAGATGC TGCCAAGGCC ATGGGATTGG CCGAGCCGCT GACCCGTGGC
TCTGCCGTTG CCTCCGAAGC GTTCTACCCG TTTGCCGATG GATTGCTGGC TGCCATTGCC
GCCGGTGCGA CGGCGGTGAT CCAGCCGGGC GGTTCCATGC GCGATGCCGA GGTGATTGCC
GCCGCCGACG AGCACGGCGT CGCCATGGTC TTTACCGGCG TGCGCCACTT CCGGCATTGA
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| Protein sequence | MLSVFDKSGI VDLARALNDM GVRLLSTGGT YKALIEAGLP ATDVSDVTGF PEIMDGRVKT
LHPAVHGGLL AIRDDEDHVK AMQAHKIEAI DLAVINLYPF EAVLAAGGDY PTTVENIDIG
GPAMIRASAK NHAYVTVVTD PADYAQLLDA LKADDCHTPY ALRQQFAARA YARTAAYDAT
ISNWFAEALA IETPRNRVIG GSLREEMRYG ENPHQKAGFY VNGDQRPGVA TATLLQGKQL
SYNNINDTDA AFELVSEFLP ENGPACAIIK HANPCGVAVG KTLADAYRRA LACDSVSAFG
GIIALNQTLD AETAEEIVKL FTEVIIAPDV TEEAKAIIAR KANLRLLTTG GLADPRAPGL
TAKTVSGGLL VQSRDNLVVE DLDLKVVTKR APTAAELEDM KLAFKIAKHV KSNAVIYAKD
GQAVGIGAGQ MSRVDSARIA AMKAEDAAKA MGLAEPLTRG SAVASEAFYP FADGLLAAIA
AGATAVIQPG GSMRDAEVIA AADEHGVAMV FTGVRHFRH
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