| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_4287 |
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| Symbol | rpmA |
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| ID | 7386531 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 3602566 |
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| End bp | 3602838 |
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| Gene Length | 273 bp |
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| Protein Length | 90 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 643652946 |
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| Product | 50S ribosomal protein L27 |
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| Protein accession | YP_002551118 |
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| Protein GI | 222150161 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0211] Ribosomal protein L27 |
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| TIGRFAM ID | [TIGR00062] ribosomal protein L27 |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.835773 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCACATA AAAAAGCTGG CGGTTCGTCG CGCAACGGTC GCGATTCCGA GTCCAAGCGC
CTTGGCGTGA AGAAGTTCGG CGGCGAAGTC GTCATTCCAG GCAATATTAT CGTTCGTCAG
CGCGGCACGC AGTGGCATCC GGGCGCAAAC GTCGGCATGG GCAAGGACCA TACGATCTTT
GCACTCACCA CCGGCAATGT CACCTACCGT ACGAAGTCCA ACGGTCGCGT CTTCGTGTCC
GTCATGCCGA AAACGGCGGA AGCCGCAGAA TAA
|
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| Protein sequence | MAHKKAGGSS RNGRDSESKR LGVKKFGGEV VIPGNIIVRQ RGTQWHPGAN VGMGKDHTIF
ALTTGNVTYR TKSNGRVFVS VMPKTAEAAE
|
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