Gene Avi_4282 details

Gene Information

• Locus tag: Avi_4282
• Symbol: obgE
• ID: 7386527
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Agrobacterium vitis S4
• Kingdom: Bacteria
• Replicon accession: NC_011989
• Strand: -
• Start bp: 3599134
• End bp: 3600234
• Gene Length: 1101 bp
• Protein Length: 366 aa
• Translation table: 11
• GC content: 59%
• IMG OID: 643652942
• Product: GTPase ObgE
• Protein accession: YP_002551114
• Protein GI: 222150157
• COG category: [R] General function prediction only
• COG ID: [COG0536] Predicted GTPase
• TIGRFAM ID: [TIGR00231] small GTP-binding protein domain; [TIGR02729] Obg family GTPase CgtA

Plasmid Coverage information

• Num covering plasmid clones: 5
• Plasmid unclonability p-value: 0.358429
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAATTTC TCGACGAGGC AAAGGTCTAT ATTCGATCAG GTGACGGCGG CGCAGGTGCC 
GTCTCGTTCC GCCGCGAGAA GTTCATCGAG TTCGGCGGGC CGGATGGTGG CGATGGCGGG 
CGCGGTGGCG ATGTTTGGGT GGAGGCCGTC AATGGTCTGA ACACCCTGAT CGATTTTCGG 
TTCCAGCAGC ATTTCAAGGC GACTGTCGGC ACCCATGGCA TGGGGCGCAA CCGCACCGGT 
GCCAATGGCG AGCATGTAAC GCTGAAAGTG CCTGTCGGCA CCCAGATCTT CGAAGAAGAT 
GCCGAAACGC TGATTGTTGA TATGGTCACC GAGGGCCAGC GCTTCCGGTT GGCCGCGGGC 
GGCAATGGCG GCTTTGGCAA TGCGCATTTC AAATCCGCGA CCAATCAGGC GCCCGATTGG 
GCCAATCCTG GTCTGGAAGG CGAGGAGAAA ACCATCTGGC TGCGGCTGAA GCTGATTGCT 
GATGCCGGTC TGGTCGGCCT GCCCAATGCC GGAAAATCCA CCTTCCTGGC GGCGGTGACG 
CGGGCTCGCC CGAAAATCGC CAATTATCCC TTCACCACCC TGCATCCCAA TCTCGGCGTG 
GCGACCGTGG ATGAGCGCGA GTTCATTCTG GCCGACATTC CCGGCCTGAT CGAAGGTGCC 
CATGAAGGGG TTGGCATTGG CGACCGTTTC CTCGGCCATG TCGAGCGCAC GCGGGTGCTG 
CTGCATCTGG TGTCCGCCCA GGAAGAGGAT GTCGCCAAGG CCTACACCAC GGTTGCCCAT 
GAGCTGGAAG CTTATGACGG TGGCTTGGAA GATAAGCCTG AAATCGTCGC CCTATCGCAG 
ATCGACGTGC TGGACGAGGA TGAGCTGAAA AAGAAGCTCA AGGCCCTGCA AAAGGCCTGC 
AGCAAGAAGC CAATGATGAT TTCGGCGATT ACCGGCAAGG GAATGCTCGA AGTCCTGCGG 
GCGTTGCGCG ACGTGATTGT TGAAAATCGC AGCTATGACG ACGAGACGAT TTCGCAGCGG 
CCCAAGAAGC ATCGCCACAA GCTGGAAGAT CGGCCCCAAC ACGAAAATGG ACCAGAGGAG 
AGTGAGGAGG GCGAGGAATG A 

 

Protein sequence

MKFLDEAKVY IRSGDGGAGA VSFRREKFIE FGGPDGGDGG RGGDVWVEAV NGLNTLIDFR 
FQQHFKATVG THGMGRNRTG ANGEHVTLKV PVGTQIFEED AETLIVDMVT EGQRFRLAAG 
GNGGFGNAHF KSATNQAPDW ANPGLEGEEK TIWLRLKLIA DAGLVGLPNA GKSTFLAAVT 
RARPKIANYP FTTLHPNLGV ATVDEREFIL ADIPGLIEGA HEGVGIGDRF LGHVERTRVL 
LHLVSAQEED VAKAYTTVAH ELEAYDGGLE DKPEIVALSQ IDVLDEDELK KKLKALQKAC 
SKKPMMISAI TGKGMLEVLR ALRDVIVENR SYDDETISQR PKKHRHKLED RPQHENGPEE 
SEEGEE