| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_4277 |
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| Symbol | |
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| ID | 7386522 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 3594906 |
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| End bp | 3595388 |
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| Gene Length | 483 bp |
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| Protein Length | 160 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 643652937 |
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| Product | rRNA large subunit methyltransferase |
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| Protein accession | YP_002551109 |
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| Protein GI | 222150152 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1576] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR00246] rRNA large subunit m3Psi methyltransferase RlmH |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCGGATAG GCATTGTTGC CGTTGGCCGG TTGAAAGCCG GGCCAGAGAA AGATCTTGTG
TCACGCTATC TGGACCGCTT TGCCAAGGCC GGTCCGGCGA GCGGGCTGGA ATTTTCTCGT
GTCAACGAGC TGCCGGAAAG CAGAGCCTCG AATTCCGCCA CCCGCAAGCG GGAAGAGGCG
GTGCAGATCG AAAAATCCCT GCCGGACAAT CCTCTTGTCG TGGCGCTGGA TGAGCGCGGC
AAAAGTTGGG ATAGCCAGGA ATTCGCGACC TATGTCGGCG ACCACAAGGA TCGCGGTCGT
CGTGACATGG TCATCGTTAT CGGTGGGGCC GATGGGCTTG ACCCGGATTT CCGCGACCGG
GCCGATCTAG TGCTGAATCT TGGAAAGATG ACGTGGCCGC ATCAGCTGGT GCGCATCATG
CTGGCCGAAC AGCTCTACCG CGCCGTTACC ATCCTCTCCG GCCATCCCTA TCATCGTTCC
TGA
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| Protein sequence | MRIGIVAVGR LKAGPEKDLV SRYLDRFAKA GPASGLEFSR VNELPESRAS NSATRKREEA
VQIEKSLPDN PLVVALDERG KSWDSQEFAT YVGDHKDRGR RDMVIVIGGA DGLDPDFRDR
ADLVLNLGKM TWPHQLVRIM LAEQLYRAVT ILSGHPYHRS
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