| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_4264 |
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| Symbol | exsE |
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| ID | 7386512 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 3581544 |
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| End bp | 3583316 |
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| Gene Length | 1773 bp |
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| Protein Length | 590 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 643652927 |
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| Product | ABC transporter nucleotide binding/ATPase protein |
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| Protein accession | YP_002551099 |
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| Protein GI | 222150142 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4178] ABC-type uncharacterized transport system, permease and ATPase components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.26783 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGATTG TACCGCGACG AATGTTTGAC AACGAAACCG CCGCGCCGGA CCTGACATTT
GCAGAACAGA TGCGCATGGC TGGCCAATCC TTCTGGTCCA GCCATGTAAG AGGGCGCATT
CTGCTGCTCT CGCTTTCGTT GCTCGTCGTC ATTTTGCTTC TGACCTATGG CCAGATATTG
CTCAATCGCT GGAACCAGCC GTTCTATAAC GCCTTGGAAA ATCGCGATCT GCCAGCTTTC
TGGCAGGAGT TGCGCAATTT CTTCTTCATT GCCGCCTTTC TGCTGGTCAT CAATGTGGCG
CAGACCTTTT TCAGCCAGAT GACCGCGCTT TACATGCGCG AAGGCTTGGC GCGCGATATG
GTCGATCAAT GGCTGAAAGG CAGGCGTGCC TATCGGCTGT CGGTGTCCAG CCCGCTTGGC
GTCAATCCAG ACCAGCGCCT GCATGAAGAT GCGCGCAAGC TGGCGGAATC GACGACGTCG
CTCACCGTCG GTCTGGTGCA ATCCACCATT CTGCTCGTCA GTTTTATCAG CGTGCTCTGG
AAATTGTCTG GGGATTTTTC GTTGACCCTG TTTGGCCACC AGATCGCCAT TCCCGGTTAT
ATGGTCTGGG CGGCGCTGAT CTATGCGGGA GGCGCGGCGG TGGCCAGCAA TCTGGTCGGC
GCCACGCTGA CCCGTCTCAA TGCCACCCGC TATGCCCGCG AGGCGGAGCT TCGTGCGGCC
CTGATGCGCA GCAACGAGCA TCTGGAGCCG ATTGCGCTAG CACGCGGCGA GGATGTCGAG
CGCGCCCAGA TCCATGCCAC CATCGACCGA GTGCTGGCGA TTATTTCCAA GCTGGCGCTG
GCGCTGACCA ATCTGACCTG GGTGTCGGCA GCCTTCGGCT GGCTGGCGCT GATCGTGCCG
GTGCTGATTG CCTCGCCAGC CTATTTCGGC GGGACGATGA CCTTCGGCGG CTTGATGATG
GCGGCCTCGG CTTTCACGCA GGTCTATACG GCCTTGCGCT GGTACGTCGA TAATTTCGGG
GCGATTGCCG ATTGGAAGGC AACGCTGCTG CGGGTGATGG TGCTGCGTGC CGCCCTGATC
GAACCGGCGC TGACCGAGAC GGTGGAAGGC CAGATCCGGG TTGAGGCCGG AAAGCCAGGC
GAACTGGCTT TCGAGGATGT CTATATCCGC ACCCCCGTCG AGGCGGAGGC CCATTGGGGC
GGTTATCATC TGAAAGAGGA CAATCCCACC ATCCTTGCCG GTGAACATGT GATGGTCAAC
GGTGATCCCG GCATCAACCG GCGACAATTC TTCAACGCCA TCGCTGGACT CTGGCCCTAT
GGCGAGGGCC TGATCCGTCT CCCGCAGGAA GATCATATCC TGTTCGTGCC GCAGACCCCC
TATCTGCCGG AGGGGCGGCT GCGCGACATC CTGGCCTATC CCGAGGATGC CTCTACCTAT
GGTGACGAGG CGATGACGCT GGCGCTGAAG ACGGTCAAGC TCAGCCGCCT TGCTAGCGCG
CTGGACGAGC GGCAGCGTTG GGACCGGGTG CTGGACAAGG ATGAGCAGAT GGCGCTGGCT
TTTGCCCATA TCCTGTTGCG CAAGCCTCAT TGGGTGGTGT TCAACGATGT GCTTGATGGG
TTGGAGCCGG AAACGGCGAA GATCCTGACC GGCGTGATGA CGCAGTTACA GGGGGCGACG
CTGATCTATA TCGGTCGCGC CCAAGGCTTT ATCGATGCGG TATCGCCGCG CATCCTGCAT
CTGGAGCGGA TGGACGTGCC GGTGCCGGAA TAG
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| Protein sequence | MMIVPRRMFD NETAAPDLTF AEQMRMAGQS FWSSHVRGRI LLLSLSLLVV ILLLTYGQIL
LNRWNQPFYN ALENRDLPAF WQELRNFFFI AAFLLVINVA QTFFSQMTAL YMREGLARDM
VDQWLKGRRA YRLSVSSPLG VNPDQRLHED ARKLAESTTS LTVGLVQSTI LLVSFISVLW
KLSGDFSLTL FGHQIAIPGY MVWAALIYAG GAAVASNLVG ATLTRLNATR YAREAELRAA
LMRSNEHLEP IALARGEDVE RAQIHATIDR VLAIISKLAL ALTNLTWVSA AFGWLALIVP
VLIASPAYFG GTMTFGGLMM AASAFTQVYT ALRWYVDNFG AIADWKATLL RVMVLRAALI
EPALTETVEG QIRVEAGKPG ELAFEDVYIR TPVEAEAHWG GYHLKEDNPT ILAGEHVMVN
GDPGINRRQF FNAIAGLWPY GEGLIRLPQE DHILFVPQTP YLPEGRLRDI LAYPEDASTY
GDEAMTLALK TVKLSRLASA LDERQRWDRV LDKDEQMALA FAHILLRKPH WVVFNDVLDG
LEPETAKILT GVMTQLQGAT LIYIGRAQGF IDAVSPRILH LERMDVPVPE
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