| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_4261 |
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| Symbol | |
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| ID | 7386510 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 3578446 |
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| End bp | 3580275 |
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| Gene Length | 1830 bp |
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| Protein Length | 609 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 643652925 |
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| Product | ABC transporter nucleotide binding/ATPase protein |
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| Protein accession | YP_002551097 |
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| Protein GI | 222150140 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0488] ATPase components of ABC transporters with duplicated ATPase domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.775404 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGCACCGC CAATCCTGAA ACTTGACAAT ATCTTCCTGT CCTTCGGCGG CGCACCGCTG
CTCAACGGCG CTGGCCTGCA AGTGGAACCG GGCGACCGAA TCTGCCTTGT CGGCCGCAAC
GGCTCTGGCA AGTCCACCCT GATGAAGATC GCCGCCGGTC TGGTCGAGGC CCAATCGGGT
GAGGTGTTTC GACACCCCTC GGCCACCATC CGCTATCTCG AACAGGCCCC GGATTTCGGC
AGCCACGCCA CCGTGCAGGC CTATGCCGAG GCCGGGCTTG GTCCGGGCGA CGACCCGTAC
CGCGTCACCT ATCTGCTGGA GCATCTGGGC CTGAGCGGTC AGGAAGATCC GAAAAGCCTG
TCGGGCGGGG AAGCGCGCCG CGCAGCCCTC GCCCGGGTGC TGGCACCGGA ACCCGACATC
CTGATGCTGG ATGAGCCGAC CAACCATCTC GACCTGCCGA CCATCGAATG GCTGGAAGAA
GAGTTGCGCA AGACCCGCAG CGCCCTTGTC CTAATCTCCC ATGACCGTCG CTTTCTGGAG
AAATGCTCGA CCGCAACCGT CTGGCTGGAT CGCGGCCTGT CGCGCCGTCT GGCGCGTGGC
TTTGGCCATT TCGAGGAATG GCGCGACAAG GTGCTGGAAG AAGAAGAGAT CGAACAGCAC
AAGCTGGGCA AAGCCATCGA GCGCGAAGAA CATTGGCTGC GCTACGGCGT AACGGCACGG
CGCAAGCGCA ATATGCGCCG GCTTGGCAAC CTCCAGACCC TGCGCGCCGA CTATCGTGGC
CATAAAGGTC CGCAAGGAAC GATCCTTGCC AGCGCCACCG AGGGCAAGGA AAGCGGCAAG
CTGGTGATAG AGGCCGACAA GATCACCAAG GCCTATGGCG AGCGGACGAT TATCGCGCCG
TTTTCAATCC GCGTGCATCG CGGCGACTGT ATCGGTCTGG TCGGCCCGAA TGGCGCTGGC
AAAACCACGC TGTTGAAAAT GCTGACCGGT CAACTTTCGC CCGACGAAGG CACGATCAAG
CTCGGCACCA ATCTGGAAAT TGCCACGCTT GACCAGAAGC GCGAGGACCT CAACCCTGAT
GACACGCTGG CCAATTACCT GACGGATGGG CGCGGCGAGA ACCTGCTGGT TAATGGCGAG
CAGAAACATG TCACCGGCTA TATGAAGGAA TTCCTATTTC AGCCGGAACA GGCCCGCACC
CCGATCCGCA ACCTGTCCGG CGGCGAGCGG GCCCGGCTGA TGCTGGCGCG GATCATGGCC
AAGCCGTCCA ACCTGCTGAT CCTTGACGAG CCGACCAATG ACCTTGATAT CGAGACGCTG
GACCTGCTTC AGGAAATCGT CACCGGCTAT TCCGGCACTG TCATCCTCGT CAGCCATGAC
CGTGATTTCC TCGACCGCAC AGTGACCTCG ACCATCGCCC CCGCCAATCC GGAAGCCCCC
AATGGCCACT GGATCGAATA TGCCGGCGGC TATTCCGACA TGCTAGCGCA GCGCCGGGGT
GTGGAAGATG AGCGCAAGCG CGTGGAAAAA GCAGAAAAAG CCAAGACGCA GGAGGGCGGC
GGCAAAAGCG GTGATACGGC GCCGAAGAAC AAGGGAAAAC TGTCCTTCAA GCAGAAATTT
GCGCTGGAAA ACCTGCCGAA GGAAATGGAA AAGGCCGAGA AAGAGATCGC GCTGCGGGAA
GCGAAAATGG CCGATCCCAA TCTGTTCGTG AAGGACCCCG CCACGTTCAA CAAGCTCGCC
GCCGAAATGG AAGTGCTACG TCAATCCATC GCCCGCATGG AAGAGGAATG GCTGGAACTG
GAAATGCTGC GTGAGGAATT GGAGGGGTAA
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| Protein sequence | MAPPILKLDN IFLSFGGAPL LNGAGLQVEP GDRICLVGRN GSGKSTLMKI AAGLVEAQSG
EVFRHPSATI RYLEQAPDFG SHATVQAYAE AGLGPGDDPY RVTYLLEHLG LSGQEDPKSL
SGGEARRAAL ARVLAPEPDI LMLDEPTNHL DLPTIEWLEE ELRKTRSALV LISHDRRFLE
KCSTATVWLD RGLSRRLARG FGHFEEWRDK VLEEEEIEQH KLGKAIEREE HWLRYGVTAR
RKRNMRRLGN LQTLRADYRG HKGPQGTILA SATEGKESGK LVIEADKITK AYGERTIIAP
FSIRVHRGDC IGLVGPNGAG KTTLLKMLTG QLSPDEGTIK LGTNLEIATL DQKREDLNPD
DTLANYLTDG RGENLLVNGE QKHVTGYMKE FLFQPEQART PIRNLSGGER ARLMLARIMA
KPSNLLILDE PTNDLDIETL DLLQEIVTGY SGTVILVSHD RDFLDRTVTS TIAPANPEAP
NGHWIEYAGG YSDMLAQRRG VEDERKRVEK AEKAKTQEGG GKSGDTAPKN KGKLSFKQKF
ALENLPKEME KAEKEIALRE AKMADPNLFV KDPATFNKLA AEMEVLRQSI ARMEEEWLEL
EMLREELEG
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