Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_4250 |
Symbol | |
ID | 7386503 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011989 |
Strand | - |
Start bp | 3572921 |
End bp | 3574108 |
Gene Length | 1188 bp |
Protein Length | 395 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 643652918 |
Product | hypothetical protein |
Protein accession | YP_002551090 |
Protein GI | 222150133 |
COG category | [S] Function unknown |
COG ID | [COG3825] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR00208] flagellar biosynthetic protein FliS |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTCCTGC CTTTCTTCCT CAAGCTCAAA CAAGAAAAAG TCCCGGTCTC CCTCGGGGAA TATCTGGCCT TGCTGGAAGG GGTGCAGCGC GGCCTTGTCG ATTTCGACAT TGAGGCTTTC TACTATTTGG CGCGCACGAC GCTGATCAAG GATGAGCGGC ATATCGACCG TTTCGATCTG GCCTTTTCTG AATGTTTCAA GGGGTTGGAA GCGACTGGTG GGTTGGAGGC GGGTGTCTCC CAGACCGCTC TGCCGGAAGA ATGGTTGCGC AAGCTGACCG AAAAACACCT GTCCGACGAA GACAAGAAAC TGATCGAAGC CATGGGTGGT TTCGACAGGC TGATGGAAAC GCTGAAACAG CGGCTGGCCG AGCAAAAGGA GCGCCATCAG GGCGGCTCAA AATGGATCGG CACGGCGGGG ACCTCGCCCT TCGGGGCCTA TGGCTACAAT CCGGAAGGGG TGAGGATCGG CCAGGACGGA TCACGCCATC GCCGCGCCGT CAAGGTGTGG GACCAGCGGG AATTTCGCAA TCTCGACGAT TCCGTCGCGC TTGGCACCCG CAATATCAAA GTTGCCCTGC GCCGGTTGCG GCGGTTCGTG CGGCAAGGTG CGCCGGACGA GTTTGATTTG AGCGGTACGA TCCGCGCAAC GGCAGAGCAT GGCTATCTTG ACATCAAGAC CCAGGCGGAA CGGCGAAATG CCGTCAAGCT GCTGATGTTC TTCGATATCG GTGGCTCCAT GGACGATCAC GTCAAAGGCG TGGAAGAGTT GTTTTCGGCA GCCCGGTCGG AATTTCGGCA TATGGAGCAT TTCTACTTCC ACAATTGCCT TTATGAGCGC GTATGGAAAG ACAATCGCCG CCGCCGGACC GATGTCATCC CGACGGAAGA GATTATCCGC ACCTATGGGC CGGATTACCG GGTGATCTTC GTCGGCGATG CGGCGATGAG CCCCTATGAG ATCACCATGA TCGGCGGATC GGTGGAGCAT TGGAATGGCG AGCCTGGCGC GCTCTGGCTT TCGCGCATCA CGGCGCATTT TCGCAAATGT CTGTGGCTCA ACCCGATGCA GCAGGAGCAT TGGGCCTATA CCCATTCGAT CGGTTTGATT TCGCGTCTCA TGGGCGGGCG CATGCATCCT CTGACGCTTG GCGGGTTGGA GGATGCGGCA CGCGAGCTGT CGCGTTAA
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Protein sequence | MFLPFFLKLK QEKVPVSLGE YLALLEGVQR GLVDFDIEAF YYLARTTLIK DERHIDRFDL AFSECFKGLE ATGGLEAGVS QTALPEEWLR KLTEKHLSDE DKKLIEAMGG FDRLMETLKQ RLAEQKERHQ GGSKWIGTAG TSPFGAYGYN PEGVRIGQDG SRHRRAVKVW DQREFRNLDD SVALGTRNIK VALRRLRRFV RQGAPDEFDL SGTIRATAEH GYLDIKTQAE RRNAVKLLMF FDIGGSMDDH VKGVEELFSA ARSEFRHMEH FYFHNCLYER VWKDNRRRRT DVIPTEEIIR TYGPDYRVIF VGDAAMSPYE ITMIGGSVEH WNGEPGALWL SRITAHFRKC LWLNPMQQEH WAYTHSIGLI SRLMGGRMHP LTLGGLEDAA RELSR
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