Gene Avi_4247 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_4247 
Symbol 
ID7386500 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011989 
Strand
Start bp3569261 
End bp3569770 
Gene Length510 bp 
Protein Length169 aa 
Translation table11 
GC content53% 
IMG OID643652914 
Producthypothetical protein 
Protein accessionYP_002551087 
Protein GI222150130 
COG category[S] Function unknown 
COG ID[COG3760] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAGAGA TTGTGCCGAA ATCGACCGCA GACCTGTTTG CATGCCTCGA TAGCCTCGGC 
ATCGAGCACC GGACAGTGTC ACATCCGCCA GTCTTTACCG TGGCAGAATC GGTCTCCCTA
CGCGATGAGA TTCCTGGCGG TCATACCAAG AACCTGTTCG TCAAGGACAA GAAGGATCAG
TTCTTTCTGC TGGTGGTCGA GGAAAACGCC ATTGTCGATT TGAAGACAGT CCATATCCTG
CTTGGGGCGG CCAGCAAGGT ATCGTTTGGC AAGCCGGAAA AGCTGATGGA GTATCTGGGG
GTTGTCCCAG GATCGGTAAC TGCTTTCGGC GCAATGAACG ATACGGGCAA CAAGGTGACA
TTCGTTCTGG ACGCAGACCT GATGCAGCAT GAGATCATCA ATTGCCATCC GCTGTCGAAT
GACGCTACAA CCTCGATCGG TCGTGATGAT CTGTTGCGCT TTCTGATGGC GACAGGACAT
GAAGCACTCG TCTTGAAAGT CACGGCCTGA
 
Protein sequence
MTEIVPKSTA DLFACLDSLG IEHRTVSHPP VFTVAESVSL RDEIPGGHTK NLFVKDKKDQ 
FFLLVVEENA IVDLKTVHIL LGAASKVSFG KPEKLMEYLG VVPGSVTAFG AMNDTGNKVT
FVLDADLMQH EIINCHPLSN DATTSIGRDD LLRFLMATGH EALVLKVTA