Gene Avi_4244 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_4244 
SymbollonD 
ID7386498 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011989 
Strand- 
Start bp3567226 
End bp3567900 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content57% 
IMG OID643652912 
ProductATP-dependent protease LA 2 
Protein accessionYP_002551085 
Protein GI222150128 
COG category[R] General function prediction only 
COG ID[COG2802] Uncharacterized protein, similar to the N-terminal domain of Lon protease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGGTCG GCAATGCGCG ATATCTGACG GCGGCTGATT TTCCGGAGAC ATTGCCGGTT 
TTTCCGCTGG CAGGAGCTCT TCTGCTGCCC GGTGGGCAAT TGCCACTGAA TATATTCGAG 
CCGCGCTATC TGGAAATGTT CGATGCCGCG CTGCGCAGCA ATCGGCTGAT CGGCATGATT 
CAACCGGCAT TGACCGAGCC CTATGAGATT GCTACCGGCA TTCCGGCCCT CTGCAGCATG 
GGATGTATCG GTCGGATCAC CTCTTTCGCC GAGACAGGCG ATGGCCGCTA TATTCTGTCG 
CTGGGTGGAA TCTGCCGTTT CCGGCTGAGC GAAGAGCTGA AAACCACCCA TCCATTCCGC 
ACGGTGCGAA TTTCGCCGTT CATGGCCGAT CTGGCGGCCG AAGGCCAGGA AAACAGCGTG 
GATCGGGAGC GGTTGCTCGC GGTGTTCCGA GCTTATCTCG ATGCCAACAA GCTGGAGGCG 
GATTGGGAAA GCGTCCAACG CGCCAGCAAT CTGACCCTGG TCAATTCTTT GTCGATGATG 
TCGCCTTTTA CGCCTGCTGA AAAACAGGCC TTACTGGAGG CCACCGATCT GCATAGCCGC 
ACGGAAACGC TGATTGCCAT TACCGAAATT TATCTGGCAC GCGGTTTCGG CGATGTGGAG 
CCGGTTTTAC AGTAA
 
Protein sequence
MQVGNARYLT AADFPETLPV FPLAGALLLP GGQLPLNIFE PRYLEMFDAA LRSNRLIGMI 
QPALTEPYEI ATGIPALCSM GCIGRITSFA ETGDGRYILS LGGICRFRLS EELKTTHPFR 
TVRISPFMAD LAAEGQENSV DRERLLAVFR AYLDANKLEA DWESVQRASN LTLVNSLSMM 
SPFTPAEKQA LLEATDLHSR TETLIAITEI YLARGFGDVE PVLQ