| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_4237 |
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| Symbol | amt |
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| ID | 7386989 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 3562812 |
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| End bp | 3564170 |
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| Gene Length | 1359 bp |
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| Protein Length | 452 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 643652907 |
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| Product | ammonium transporter |
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| Protein accession | YP_002551080 |
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| Protein GI | 222150123 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0004] Ammonia permease |
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| TIGRFAM ID | [TIGR00836] ammonium transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCGTTTT CCACATTCAA ATCTCAAGCC TTGCGCCTCG GGGCTGCATC GGCGGCCTTG
ATGGCGCCAG CGATCGCCTT TGCGCAGGAT GCAGCGCCAG CCGTTGCGGC GGCAGCTGCT
CCGGTTCCCG ACAAGGGCGA TACCGCCTTC ATGTTCCTGT CCACCATCCT CGTTCTGTTC
ATGGCCGTTC CCGGCCTTGG CCTGTTCTAC GGCGGACTGG TGCGCGCCAA GAACATGCTG
TCCGTGCTGA TGCAGTGCAC CGTCATTGCC GCCATGGTGA TGATCGTCTG GGTCATCTAT
GGTTATTCCT TCGCCTTCGG CGGCGGAGAA AGCCCGTTCT TCGGCGGCTT TGCCAAGATG
TTCCTGGCTG GCGTCGACAC CACGACAACG GCTGCTACTT TCAGCAAGGG CGTCGTCATT
CCTGAATATA TCTTCATGCT GTTCCAGATG ACCTTTGCGG CCATCACGCC TGCCCTGATC
ATCGGCGCCT TCGCGGAACG CATCAAGTTC TCGGCTGCGA TCCTGTTCTG CCTGCTTTGG
GTCACCTTCG TCTATTTCCC GGTCGCCCAT ATGGTCTGGG ATGCCAAGGG CTATCTCTTC
GGCCTCGGCG CCCTTGATTT TGCCGGCGGC ACAGTCGTTC ACATCAATGC CGGTGTTGCC
GGTCTGGTCG GTGCGATCCT GGTCGGCAAG CGTACAGGCT ATGGCAAGGA CATGATGGCC
CCCCATTCCA TGACGCTCAC CTATGTCGGT GCCGCCATGC TCTGGGTCGG CTGGTTCGGC
TTCAATGCCG GCTCCAACCT CGAAGCCTCC GGTGGTGCGA TGCTCGCAAC CGTCAACACC
TTTATTGCCA CGGCTGCGGC TATCCTGTCC TGGTGCGTGG TTGAATCCTT CACCCGCGGC
AAGGCCTCGA TGCTGGGCGC TGCCTCCGGT ATGATTGCTG GCCTCGTTGC CATCACGCCT
GCCGCCGGTA TCGTCGGCCC GATGGGCGCA ATCGTCATGG GTGTGATCGT TTCGCCGCTC
TGCTACTTCT TCGTCTCTGT CGTGAAGAAC AAGTTCGGTT ATGACGATAC GGCTGACGTG
TTCGGCGTCC ACGGCATTGG CGGCATGTTC GGCGCTATTT CCACCGGCAT TTTCGCCAGC
GCTTCGCTGG GTGGCGTCGG CTATGTCGGC GAACAGACGA TGGGCGGCCA GGTCATGGTA
CAGCTTCAGG CCGTGGTCAT CACGGTCCTT TGGACCGGTA TCGGCTCTGC GATCCTCTAC
AAGATCGTCG ATGTGATCGT TGGTCTGCGT GTGCCGGTTG AAGCCGAGCG CGAAGGTCTC
GACCTCGCCT CTCACGGTGA AGCTGCTTAT CACTCCTGA
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| Protein sequence | MSFSTFKSQA LRLGAASAAL MAPAIAFAQD AAPAVAAAAA PVPDKGDTAF MFLSTILVLF
MAVPGLGLFY GGLVRAKNML SVLMQCTVIA AMVMIVWVIY GYSFAFGGGE SPFFGGFAKM
FLAGVDTTTT AATFSKGVVI PEYIFMLFQM TFAAITPALI IGAFAERIKF SAAILFCLLW
VTFVYFPVAH MVWDAKGYLF GLGALDFAGG TVVHINAGVA GLVGAILVGK RTGYGKDMMA
PHSMTLTYVG AAMLWVGWFG FNAGSNLEAS GGAMLATVNT FIATAAAILS WCVVESFTRG
KASMLGAASG MIAGLVAITP AAGIVGPMGA IVMGVIVSPL CYFFVSVVKN KFGYDDTADV
FGVHGIGGMF GAISTGIFAS ASLGGVGYVG EQTMGGQVMV QLQAVVITVL WTGIGSAILY
KIVDVIVGLR VPVEAEREGL DLASHGEAAY HS
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