| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_4232 |
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| Symbol | xth |
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| ID | 7386986 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 3558158 |
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| End bp | 3558961 |
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| Gene Length | 804 bp |
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| Protein Length | 267 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 643652904 |
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| Product | exodeoxyribonuclease III |
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| Protein accession | YP_002551077 |
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| Protein GI | 222150120 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0708] Exonuclease III |
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| TIGRFAM ID | [TIGR00195] exodeoxyribonuclease III
[TIGR00633] exodeoxyribonuclease III (xth) |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00320873 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTTTTT CCCTGACCAC CTGGAATATC AATTCGGTGC GGCTGCGCAT GCCGATTGTC
GAGCATTTTC TCAAACTGCG TCAGCCGGAT ATTCTCTGCC TTCAGGAAAT CAAATGCCAG
AACCATGAGT TTCCGTTGGA GGCGTTTCAG GCGCTGGGCT ATCCCTATGC TATTCTGCAT
GGCCAGAAGG GCTATCATGG CGTTGCCACC GTCTCGAAAT TTCCTTTGAC CGAAGACCAC
CGGCAGGATT TCTGCGGCGT CGGTGACAGC CGCCATATTT CGGCGATTTT TGAGTGGAAC
GGGCGGCGTA TTCGCCTGCA TAATTTCTAT GTGCCCGCCG GAGGCGACGA GCCCAACCGG
GACATCAATC CAAAATTCGG CCACAAGCTG GATTTCGTCG AGGAAATGAA GGCGCTGTCG
GCCAGTGCCG AGCCAAATAC GTCGGCTATC CTGGTCGGCG ACCTGAATAT CGCGCCGCTG
GAGCACGATG TCTGGTCGCA CAAGCAGTTG CTGAAGATCG TGTCCCATAC CCCGGTGGAA
ACCGCAGGCC TGCTTGACGT GATTAATCGC GGTGGATGGG TGGACCTGAT GCGCCAGCTG
GTCGATCCAT CGCAAAAACT CTATACGTGG TGGAGCTACC GGGCCAAGGA CTGGGACAGC
GCCGACAAGG GCCGCCGCCT CGACCATATC TGGTCGTCAC CGGATCTGTT ACCGTCGCTG
AAAACCATCG AGATTTTGCG CGAGGCACGC GGCTGGGAAA AGCCTTCTGA CCACGTGCCG
GTGACGGTGC AGTTCGCGCT TTGA
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| Protein sequence | MTFSLTTWNI NSVRLRMPIV EHFLKLRQPD ILCLQEIKCQ NHEFPLEAFQ ALGYPYAILH
GQKGYHGVAT VSKFPLTEDH RQDFCGVGDS RHISAIFEWN GRRIRLHNFY VPAGGDEPNR
DINPKFGHKL DFVEEMKALS ASAEPNTSAI LVGDLNIAPL EHDVWSHKQL LKIVSHTPVE
TAGLLDVINR GGWVDLMRQL VDPSQKLYTW WSYRAKDWDS ADKGRRLDHI WSSPDLLPSL
KTIEILREAR GWEKPSDHVP VTVQFAL
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