Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_4226 |
Symbol | |
ID | 7386982 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011989 |
Strand | - |
Start bp | 3555044 |
End bp | 3555604 |
Gene Length | 561 bp |
Protein Length | 186 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 643652900 |
Product | hypothetical protein |
Protein accession | YP_002551073 |
Protein GI | 222150116 |
COG category | [S] Function unknown |
COG ID | [COG3786] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCAAACC CACCTTCCAG AGCCGGGTCT CAACCGCGCC AAGGTCTTCG CAGTATTGTG GTGCGCCGCA AGCCCGGTTG CAAGAGCCAG GCCATCGTTC AGGCTGGACC GCTTCGGTTT CCCGCCGCCA TCGGACGGTC GGGCATCACG GCTTTCAAGC GTGAGGGCGA TGGCGCAACC CCACGGGCAT CGATGCGGTT GCTTTACGGC TACTTTCGGG CGGAGTCTCG TGCGGCCATA GGCTCGCGCC TGCCTTTGAG GTCGATTCGT GCTGACATGC TGTGGTGCGA TGCGCCGGGC CATCCGGCCT ATAACCGTCC GGTCAAGGCA CCGTTTACCC CCAGTCACGA GCGGTTGCAG CGACAGGACA GGCTTTACGA TGTCTGTCTG GTGATGGACT GGAACGTCAC CTGCCGTAAG CAGGGCTGCG GGTCTGCGAT CTTTTTCCAC GTGGCGCGCC CGGACTATAC TCCGACGGAG GGCTGCGTGG CGATTAGCCC CGCCGACATG CGCCGCCTGC TGGCGGTTGT TTCACAGGCC ACCATTGTCA CGGTTTTGTG A
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Protein sequence | MPNPPSRAGS QPRQGLRSIV VRRKPGCKSQ AIVQAGPLRF PAAIGRSGIT AFKREGDGAT PRASMRLLYG YFRAESRAAI GSRLPLRSIR ADMLWCDAPG HPAYNRPVKA PFTPSHERLQ RQDRLYDVCL VMDWNVTCRK QGCGSAIFFH VARPDYTPTE GCVAISPADM RRLLAVVSQA TIVTVL
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