| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_4218 |
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| Symbol | |
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| ID | 7386978 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 3548516 |
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| End bp | 3549340 |
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| Gene Length | 825 bp |
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| Protein Length | 274 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 643652896 |
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| Product | ABC transporter membrane spanning protein (amino acid) |
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| Protein accession | YP_002551069 |
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| Protein GI | 222150112 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCTTTC AGACCCTTCC GAACGGTAGC AAGCAGGATT TCCCCTGGTG GCTGGTGGCG
CTTGGCCTGC TGGCGCTAGC GCTGGCCATC ACCATCGCCG TCAACGACCT CTATAGCCAG
GTGTTCGAAA CCGTCTCACG CGGTATCGGC GTCACCGTTT TCGTCACGCT TACTGGTTTT
GCCCTTGCCT CCTTGCTTGG CCTGCTGATT GCGCTGGCGG GCATGGCCGA TAGCATCGTG
CTGCGTCAGG CCGCGCGATT CTATATCGAG ATCGTCAGGG GCATTCCGGT CCTGGTCCTG
CTGTTTTACG TGGCCTTCGT CGGCGCGCCC GGCTTCGTTG CTCTCTATAA TACCCTCACC
GCCCCGCTTG TTTCCACCGG CTGGCTGGAA CCGCTTCAAG TGCGCGATGT CTCGCTGATG
TGGCGGGCGA TTTTTGCGCT TTGCATCGGT TATTCGGCCT TCATCGCCGA AATCTTCAGA
GCCGGCATCG AATCCATCGA CAAGGGACAG ATCGAGGCCG CCAAATCGCT GGGACTGAAC
CGGACGCAAC GGTTTCGCCT GGTGATACTG CCTCAAGCCA TACGGGTGAT TTTCCCGCCG
CTCTCCAACG ACTTTGTCGC CATGGTCAAG GATTCATCGC TGGTCTCGGT GCTGGGCGTC
GCCGATATCA GCCAGGCAGG AAAGATCTAT GCCTCCGGGT CCTTCCGGTT TTTCGAGACC
TATTCCATCG TCGCCTATAT TTACCTGATC CTCACCATCG GCCTGTCCCT CATCCTGCGG
CGCGTGGAAA AGCGGATGCG GTCCCGCGAT GGCCAGCGAA CCTAG
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| Protein sequence | MAFQTLPNGS KQDFPWWLVA LGLLALALAI TIAVNDLYSQ VFETVSRGIG VTVFVTLTGF
ALASLLGLLI ALAGMADSIV LRQAARFYIE IVRGIPVLVL LFYVAFVGAP GFVALYNTLT
APLVSTGWLE PLQVRDVSLM WRAIFALCIG YSAFIAEIFR AGIESIDKGQ IEAAKSLGLN
RTQRFRLVIL PQAIRVIFPP LSNDFVAMVK DSSLVSVLGV ADISQAGKIY ASGSFRFFET
YSIVAYIYLI LTIGLSLILR RVEKRMRSRD GQRT
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