Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_4209 |
Symbol | |
ID | 7386971 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011989 |
Strand | - |
Start bp | 3542441 |
End bp | 3543184 |
Gene Length | 744 bp |
Protein Length | 247 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 643652889 |
Product | hypothetical protein |
Protein accession | YP_002551062 |
Protein GI | 222150105 |
COG category | [R] General function prediction only |
COG ID | [COG0730] Predicted permeases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.732816 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCAATCG AAATCATCAG TCTGATGTTT GTCGCCGGGT TTTTCTCGGC GGTGGTCAAT GCCATTGCCG GTGGCGGCAC GTTTCTGACC TTCGGGGTGC TGACTTTGGC GGGCCTGCCA TCGGTCACGG CCAATGCGAC CTCCTCCATC ATCCAGTTTC CCGGCTATAT CACCTCGACG CTCGCCTATC GGCGTGAAAT CGCTGCCCAT TGGAAAAGTG CTGCGCTGCT GTCGTTCATC TCAGCCGTTG GTTCGCTGGT CGGCGCGCTG ATCCTGATTT CCCTCTCCAA TCCCACCTTT AGCCGCCTGG TGCCTTGGCT GTTGCTGATG GCAACGCTGG TGTTTGCGCT TGGTCCCCGG CTGAGGCGCA AGGCTGATCA GCAGCACCCC GCCAACCTGC TCGGATTGCT GTTGCAGGGC ATCACCTCTA TCTATGGCGG ATTTTTCGGG GCGGGCATGG GCATCATGAT GCTGGCCTCG CTGCAATTTG CCAGCGGCGG CGATTACCAC CACCTGAATG CGCTGAAAAA CCTGCTGGCT ATTGTCATCG CCGCGATTGC CATCCTGGTG TTTGCAACGG CTGGCGCAGT GTCGTGGCTG CATGCGGGCA TTATGCTGCC TGCGGCGGCA TTGGGTGGCT ATGCTGGCGT GCACATGGCC AAACGTGCGC CGCAGACATT GCTGCGCTGG CTGGTGATCG CCGCTGGCCT GTCGCTGGCG ATCTATTACT TTTTTAAAGG CTGA
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Protein sequence | MSIEIISLMF VAGFFSAVVN AIAGGGTFLT FGVLTLAGLP SVTANATSSI IQFPGYITST LAYRREIAAH WKSAALLSFI SAVGSLVGAL ILISLSNPTF SRLVPWLLLM ATLVFALGPR LRRKADQQHP ANLLGLLLQG ITSIYGGFFG AGMGIMMLAS LQFASGGDYH HLNALKNLLA IVIAAIAILV FATAGAVSWL HAGIMLPAAA LGGYAGVHMA KRAPQTLLRW LVIAAGLSLA IYYFFKG
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