| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_4203 |
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| Symbol | ffh |
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| ID | 7386966 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 3538680 |
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| End bp | 3540260 |
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| Gene Length | 1581 bp |
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| Protein Length | 526 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 643652884 |
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| Product | signal recognition particle protein |
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| Protein accession | YP_002551057 |
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| Protein GI | 222150100 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0541] Signal recognition particle GTPase |
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| TIGRFAM ID | [TIGR00959] signal recognition particle protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTGAGA ACCTGCAGGA CCGCCTTGGC TCCATCTTGA ATGGACTGAC CGGCCGTGGC
GCGTTGTCGG AAGCCGATGT TTCCGCCGCC CTGCGGGAGG TTCGCCGCGC CCTGCTGGAA
GCCGACGTCG CCTTGGAAGT GGTGCGCAGC TTTACCGACA AGGTGCGGGA AAAGGCGGTT
GGTGCCGCCG TTCTGAAAGC CATCAAGCCC GGCCAGATGG TCGTCAAGAT CGTCCATGAC
GAATTGGTCG ACATGCTGGG CGCAGAAGGC GTCTCCATCG ACCTGCACGC ACCGGCCCCG
GTTGTCATCA TGATGGTCGG CCTCCAAGGC TCGGGCAAGA CCACGACGAC CGGCAAGATC
GCCAAGCGGT TGACCGACCG CGATCGCAAA AAGGTCCTGA TGGCCTCGCT GGACACCCGC
CGTCCCGCCG CCCAGGAACA ATTGCGGCAA TTGGGCGTGC AGACCGGCGT CGATACGCTG
CCGATCATTG TAGGCCAGTC GCCGACCGAT ATTGCCAGCC GCGCCGTGCA GGCGGCCAAG
CTCGGCGGCC ATGACGTCGT CATCCTCGAT ACCGCAGGCC GTACGCATAT CGACGAGCCC
TTGATGGTCG AAATGGCCGA CATCAAGAAG AATGCCAAGC CGCACGAAAT TCTGCTGGTT
GCCGATGCGC TGACCGGTCA GGACGCCGTC AATCTCGCCC GCAATTTCGA TGAGCGCGTC
GGCATTACCG GCCTGGTCCT GACCCGTATG GACGGCGATG GCCGTGGCGG CGCGGCCCTG
TCCATGCGCG CCGTCACCGG CAAGCCGATC AAGCTGATCG GCGTCGGCGA AAAGATGACG
GAACTGGACG AGTTCCATCC GCGCCGGATT GCCGACCGCA TTCTCGGCAT GGGCGATATC
GTTTCGCTGG TCGAAAAGGC CGCTGAAAAT ATTGACGCCG AAAAGGCCGC CGCCATGGCC
GCCAAGATGG CCAAGGGCAA GTTCGATCTC GACGACCTCG CCGACCAGCT GCGCCAGATG
CAGAAAATGG GCGGCATGGG CGGCATTATG GGCCTGATGC CCGGCATGGC CGGAATGAAG
GACAAGATGG CCGCCTCAGG CATGGACGAC AAGATGTTCG GTCGCCAGAT CGCCATCATC
TCGTCGATGA CCAAGGCCGA GCGCACCAAT CCCGACATTC TCAAGCATTC CCGCAAGAAG
CGCATTGCCA AGGGCTCCGG CACCGATGCG TCCGAGATCA ACAAGCTTTT GAAAATGCAC
CGCCAGATGG CCGACATGAT GAAAATGATG GGCGGCAAGA AGGGCGGCGG CATGATGAAG
CAGCTGATGG GCGGTCTGGC CGGCAAAATG GGCATGGGTG GAATGGGCGG GATGGGCGGG
ATGGGTGGCA TGCCGGATCT CAGCTCCATG GACCCCAAGC AGCTGGAAGC GCTGGCACGC
CAGGCTGAAG CCGCCGGTAT CAAGCCGCCT CCGGGCCTGG GTGGTAGCAT GGGTGGCGGG
CTTCCCGGCC TGGGTGGTGG AAAATTGCCT GGACTTGGTG GAGGCTTTCC CGGCCTTCCC
GGTCTCCCAA AGAAGAAGTG A
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| Protein sequence | MFENLQDRLG SILNGLTGRG ALSEADVSAA LREVRRALLE ADVALEVVRS FTDKVREKAV
GAAVLKAIKP GQMVVKIVHD ELVDMLGAEG VSIDLHAPAP VVIMMVGLQG SGKTTTTGKI
AKRLTDRDRK KVLMASLDTR RPAAQEQLRQ LGVQTGVDTL PIIVGQSPTD IASRAVQAAK
LGGHDVVILD TAGRTHIDEP LMVEMADIKK NAKPHEILLV ADALTGQDAV NLARNFDERV
GITGLVLTRM DGDGRGGAAL SMRAVTGKPI KLIGVGEKMT ELDEFHPRRI ADRILGMGDI
VSLVEKAAEN IDAEKAAAMA AKMAKGKFDL DDLADQLRQM QKMGGMGGIM GLMPGMAGMK
DKMAASGMDD KMFGRQIAII SSMTKAERTN PDILKHSRKK RIAKGSGTDA SEINKLLKMH
RQMADMMKMM GGKKGGGMMK QLMGGLAGKM GMGGMGGMGG MGGMPDLSSM DPKQLEALAR
QAEAAGIKPP PGLGGSMGGG LPGLGGGKLP GLGGGFPGLP GLPKKK
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