| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_4187 |
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| Symbol | acnA |
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| ID | 7386953 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 3525898 |
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| End bp | 3528591 |
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| Gene Length | 2694 bp |
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| Protein Length | 897 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 643652871 |
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| Product | aconitate hydratase |
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| Protein accession | YP_002551044 |
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| Protein GI | 222150087 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1048] Aconitase A |
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| TIGRFAM ID | [TIGR01341] aconitate hydratase 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTCCAAAT CGCTTGACAG TTTCAATTGC CGGTCGACGC TTTCCGTCGA TGGCAAGGAT
TATGTCTATT ACAGTATCCC CAAGGCCGAG GCCAATGGCC TGACCGGCGT CTCCAAACTG
CCCTATTCCA TGAAGGTGCT GCTGGAAAAC CTGCTGCGCA ACGAAGATGG CCGCTCCGTC
ACCAAGGCCG ACATTGAAAA CGTCGCCGCC TGGCTCGTTG ACAAGGGCAC GGCTGAAAAC
GAAATCGCTT ATCGCCCTGC CCGCGTGCTG ATGCAGGACT TCACCGGCGT TCCCGCCGTG
GTCGATCTGG CCGCCATGCG CGATGCCATG GTGTCGCTGG GTGGCGATCC GGAAAAGATC
AACCCGCTGG TTCCCGTTGA CCTCGTCATC GACCACTCGG TTATTGTTGA CGAATTCGGC
ACGCCAACCG CTTTTGCCCG CAACGTTGAG CTGGAATATG AGCGCAACGG CGAGCGTTAC
CGCTTCCTCA AGTGGGGCCA GCAGGCGTTC AAAAACTTCC GCGTTGTTCC TCCGGGCACT
GGCATCTGTC ACCAAGTCAA CCTTGAATAT CTCGGCCAGA CCGTTTGGAC CAAGGATGAA
GACGGCGAAA CCACTGCCTA TCCTGACACC TGCGTTGGCA CAGACAGCCA CACCACCATG
ATCAATGGTC TGGGCGTTCT GGGCTGGGGC GTGGGCGGTA TCGAAGCGGA AGCGGCCATG
CTTGGTCAGC CGGTTTCCAT GCTTCTGCCT GAAGTCATCG GCTTCAAGCT GACTGGCAAG
GTCAAGGAAG GCGTCACCGC CACCGACCTC GTGCTGACCG TTGTGCAGAT GCTGCGCAAG
AAGGGCGTTG TGTCCAAGTT CGTTGAATTC TTCGGCCCCG GTCTGGATTC GATGTCTTTG
GCCGACCGCG CCACCATTGG CAACATGGGC CCAGAATACG GCGCGACCTG CGGTTTCTTC
CCGGTTGACG GCGAAACCAT CAACTACCTC ACCATGTCGG GCCGCACCAA GGACCGGATT
GCACTGGTCG AAGCCTATTC CAAGGCGCAG GGCATGTGGC GCGATGGCGA CGGTTCCGAA
CTGGTGTTCA CCGACACGCT GGAACTCGAT CTCGGCGACG TTGTGCCGTC GATGGCCGGT
CCAAAGCGTC CGGAAGGCCG TCTGGCCTTG GAAACGATTG CGCCAAACTT CGCAACGGCT
CTGGAAGGCG ACTATAAGAA GCCCGGCCAG CTTTCCAATC GCTATCCGGT TGAAGGCACT
GACTTCGACC TCGGTCATGG CGATGTGGCG ATTGCCGCTA TCACCTCCTG CACCAACACC
TCCAACCCGA GCGTGTTGAT TGCCGCTGGC CTTCTGGCCC GCAATGCTGT TGCCAAGGGC
CTGAAGTCCA AGCCTTGGGT CAAGACCTCG CTGGCACCTG GAAGCCAGGT TGTTGGTGAA
TACCTGTCCA AGTCTGGTCT GCAAGTGTCT CTGGATGCGC TTGGCTTCAA CCTCGTTGGT
TTCGGCTGCA CCACCTGCAT CGGCAACTCT GGCCCGCTGC CAGCGCCGAT CTCCAAGACC
ATCAACGACA AGGGCCTGAT CACCGCTGGC GTGTTGTCGG GCAACCGTAA CTTTGAAGGC
CGTATCTCGC CGGACGTTCA GGCCAACTAT CTGGCCTCTC CGCCGCTGGT TGTGGCTTAT
GCGCTGGCCG GTTCAGTCCA GAAGGACCTG ACCACGGAGC CTTTGGGCGA AGATCAGGAC
GGCAATCCGG TTTTCCTCCG GGACATCTGG CCAACCTCGA AGGAAATCCA GGAATTCATC
CTGAAATACG TCACCCGCGA GCTGTATGAA AGCAAATATG CCGACGTGTT CAAGGGCGAT
GAAAACTGGC AGGCCGTTCA GATTCCGGCT GGCCAGACCT ATGCCTGGGA CGACAACTCC
ACCTATGTGC AGAACCCGCC TTACTTCGTG GGCATGGGCA AGAGCGGCTC CGGTCTCAAG
AACATCACCA ATGCTCGCGT ATTGGGTCTG TTCGGCGACA AGATCACCAC CGACCATATC
TCGCCGGCTG GCTCCATCAA GGCGGCGTCG CCTGCTGGCG CTTATCTGCT GGACCATGGC
GTTGGCGTGG CTGACTTCAA CCAGTACGGC ACCCGTCGCG GCAATCACGA AGTGATGATG
CGCGGTACCT TCGCCAATAT CCGTATCCGC AACCACATGC TCGGCCCGAA CGGCAAGGAA
GGTGGCTACA CCATCCATTA TCCGTCCAAG GAAGAGATGT CGATTTACGA TGCGGCCATG
CAGTACAAGG CCGAGGGCGT TCCCCTGGTG ATCTTTGCAG GCGTCGAATA CGGCAACGGC
TCGTCGCGTG ACTGGGCTGC CAAGGGCACC AACCTGCTCG GCGTGCGCGC CGTGATCGCC
CAGTCGTTCG AGCGTATCCA CCGCTCCAAC CTGGTCGGCA TGGGCATTGT ACCTTTCTGC
TTCGAGGACG GCACCACCTG GGCCAGCCTC AACCTGAAGG GCGACGAGAC CGTGACGATC
GAAGGCCTCG AAGGCGAGAT CAAGCCACGC GAGAAGAAGA TCGCCAAGAT CACCTATGCC
GATGGCACGG TAAAGGATCT GCCGCTGATC TGCCGCATCG ATACGCTTGA CGAAGTGACC
TACGTGAATA ACGGTGGCAT CTTGCAGACC GTTCTGCGCG ATCTGGCCGC TTAA
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| Protein sequence | MSKSLDSFNC RSTLSVDGKD YVYYSIPKAE ANGLTGVSKL PYSMKVLLEN LLRNEDGRSV
TKADIENVAA WLVDKGTAEN EIAYRPARVL MQDFTGVPAV VDLAAMRDAM VSLGGDPEKI
NPLVPVDLVI DHSVIVDEFG TPTAFARNVE LEYERNGERY RFLKWGQQAF KNFRVVPPGT
GICHQVNLEY LGQTVWTKDE DGETTAYPDT CVGTDSHTTM INGLGVLGWG VGGIEAEAAM
LGQPVSMLLP EVIGFKLTGK VKEGVTATDL VLTVVQMLRK KGVVSKFVEF FGPGLDSMSL
ADRATIGNMG PEYGATCGFF PVDGETINYL TMSGRTKDRI ALVEAYSKAQ GMWRDGDGSE
LVFTDTLELD LGDVVPSMAG PKRPEGRLAL ETIAPNFATA LEGDYKKPGQ LSNRYPVEGT
DFDLGHGDVA IAAITSCTNT SNPSVLIAAG LLARNAVAKG LKSKPWVKTS LAPGSQVVGE
YLSKSGLQVS LDALGFNLVG FGCTTCIGNS GPLPAPISKT INDKGLITAG VLSGNRNFEG
RISPDVQANY LASPPLVVAY ALAGSVQKDL TTEPLGEDQD GNPVFLRDIW PTSKEIQEFI
LKYVTRELYE SKYADVFKGD ENWQAVQIPA GQTYAWDDNS TYVQNPPYFV GMGKSGSGLK
NITNARVLGL FGDKITTDHI SPAGSIKAAS PAGAYLLDHG VGVADFNQYG TRRGNHEVMM
RGTFANIRIR NHMLGPNGKE GGYTIHYPSK EEMSIYDAAM QYKAEGVPLV IFAGVEYGNG
SSRDWAAKGT NLLGVRAVIA QSFERIHRSN LVGMGIVPFC FEDGTTWASL NLKGDETVTI
EGLEGEIKPR EKKIAKITYA DGTVKDLPLI CRIDTLDEVT YVNNGGILQT VLRDLAA
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