| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_4162 |
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| Symbol | |
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| ID | 7386937 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 3511433 |
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| End bp | 3512287 |
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| Gene Length | 855 bp |
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| Protein Length | 284 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 643652855 |
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| Product | oxidoreductase |
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| Protein accession | YP_002551028 |
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| Protein GI | 222150071 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.602267 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGACA TTCAATCGGT AATTGCCAAG GGCAAGGTCG CGGTCGTCAC CGGGGCAGCC
TCCGGCATCG GCCTTGCCGC CGCCAAGGCT TTCGCCAGCC AGGGCATGTG CGTGGTGCTC
GCCGATCTCG GCGGAGACGC GCTTGCCCAT GCGCGCAGCG AAGTCGCCAC AGTCTCGGAA
AATCCGGAGA GCGATATCGT CGCCATCGAG ACAGACGTCA GCAAGCTGGA TGAACTGGAA
GCCCTGGAGC GCGCCGTGCT CCAACGCTTC GGGCGTGTCC ACCTGCTGAT GAACAATGCC
GGCATCCAGC CGGGCAGCAG CCTGTTCGGG CCACAGGTCA ACTGGGACAA TGTGTTTGCT
GTCAACCTGA TGGGCGTCAT CCATGGCACC AGGGTATTCG GGCCTGATAT GATCGCCCAC
AGGGACCCGG CCATCATCAT CAATACCGGC TCCAAGCAGG GCATCACCAC CCCGCCGGGC
GATCCCGCCT ATAATGTTGC CAAGGCCGGG GTCAAAGCGT TCACCGAGGC CTTGCAGCAT
GAACTGCGCA ACACGCCGGA CTGTAATGTC AGCGCCCATC TGCTGATCCC CGGCTTCGTC
TTCACCGGTC TGACTGCTGG CGAGCGGACA ACAAAACCTG ACGCGGCCTG GACCCCGGAA
CAGACGGTGG ATTTCATGCT GGACAGCCTC AAACGCGGCG ATTTCTACAT TCTCTGCCCT
GACAACGATG TGCAACGGGC CGTGGATGAA AAGCGTATCG CCTGGGCTGC CGGTGACATC
ATCGAAAACC GTCCACCGCT GTCGCGCTGG CACCCGGATT ACGACGAAGC ATTCAAGGCA
CATCTGAAAG GCTGA
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| Protein sequence | MTDIQSVIAK GKVAVVTGAA SGIGLAAAKA FASQGMCVVL ADLGGDALAH ARSEVATVSE
NPESDIVAIE TDVSKLDELE ALERAVLQRF GRVHLLMNNA GIQPGSSLFG PQVNWDNVFA
VNLMGVIHGT RVFGPDMIAH RDPAIIINTG SKQGITTPPG DPAYNVAKAG VKAFTEALQH
ELRNTPDCNV SAHLLIPGFV FTGLTAGERT TKPDAAWTPE QTVDFMLDSL KRGDFYILCP
DNDVQRAVDE KRIAWAAGDI IENRPPLSRW HPDYDEAFKA HLKG
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