| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_4158 |
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| Symbol | dcp |
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| ID | 7386934 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 3506323 |
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| End bp | 3508407 |
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| Gene Length | 2085 bp |
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| Protein Length | 694 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 643652852 |
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| Product | peptidyl-dipeptidase |
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| Protein accession | YP_002551025 |
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| Protein GI | 222150068 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0339] Zn-dependent oligopeptidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.964957 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACATTTC CAGACCGTAA TCTTGGCCCC AACGGTGCCT TTGCCACCGT CACCGAATGG
AATGGGCCGC ATGGCCTGCC GAATTTCACC GCCATCGGCG ATGAGGATTT TGTCCCGGCT
TTCGACATGG CGCTGGCTGA ACACGACGCT GATATCGACA CCATCGCCCA TTATCCGTCG
GAGCCGACAT TCGACAACAC CATCGTTGCG CTGGAGATAG CCGGGGACGG CCTGTCGCGG
GTCTCGGCGC TGTTCTGGAA CAAGGCCGGT GCCGATACCA ATCAGGTTAT CCAGGCGCTG
GAGCGCGAGA TCGCGCCGAA AATGTCGCGC CACTATTCAA AGATCAGCAT GAATGCCGCA
CTGTTTGCCC GCGTCGATGC CTTATGGGAA AAGCGCGACA GCCTGGGCCT GACGCTGGAG
CAGACCCGGG TGCTGGAGCG GCACTGGAAA GGCTTCGTCA AGGCTGGTGC CAAGCTCGCC
AAGCCCGAAC AGGAGCGGTT GGCGGCGATC AATGAGCGGC TGGCCAGCCT CGGTGCCAAT
TTCGGCCAGA ATGTGCTGGG CGATGAGACC GATTGGGCAT TGCCGCTGAC CAGCGATGAC
GAGCTGGCGG GCATTCCCGA TTTTCTGAAG GATGCGATGG CCTCTGCCGC GCAAGCCCGT
GGCAAGGGGG AATCCTATGC CGTGACGCTG TCGCGCTCGG TCATCGTCCC CTTCCTGACC
TTTTCCGAGC GGCGGGACCT GCGCGAAACA GCCTTCAAGG CCTGGGTGGC GCGTGGTGAA
AACGGTGGTG AACGTGACAA CCGCGCCATC GTTACCGAAA CCCTGGCGCT TCGGGCGGAA
AAGGCCAAGC TATTGGGCTA CAAGAATTTT GCCGCCCTGA AGCTCGACAA TACCATGGCC
AAGACCCCGG AAGCGGTCAA CGGCCTGCTG ATGCAGGTCT GGGAACGCGC CGTCGCCCAA
GCCGCCATCG AAGAGCAGGA ATTGGCGGAG TTGATTGCCA AGGACGGTAA GAATCACGCG
GTTGCGCCCT GGGATTGGCG TTTTTATGCC GAGAAGCTGC GCTCCGAGCG GTTCAATTTT
TCGGAAGCTG AACTGAAGCC TTATCTGCAA CTGGAAAAAA TCATCGAAGC CTGCTTTGCC
GTGGCGCAAA AGCTGTTCGG CATCACTGCC GTGCCGCTGA AGGACGTGAA GGGCTATCAC
CCCGATGTGC GGGTATTTGA AATCCGCGAG GCGGATGGGA CAGTGAAGGC GCTGTTCCTT
GGCGATTATT TCGCCCGGTC CTCGAAGCGC TCCGGTGCTT GGATGAGCTC CTTCCAGTCG
CAGCACAAGC TGCCGCTGAA GAACGGTGCG CAGGGCGAAT TGCCGATCAT TTACAATGTC
TGCAATTTCG CCAAGCCTGC CGAAGGCAAG CCAGCGCTGC TGTCGCTGGA CGATGCCCGC
ACGCTATTTC ATGAATTCGG TCATGCCCTG CATGGGATGC TGTCTGATGT CACTTACCCG
TCAGTATCGG GCACGGCGGT GTCGCGTGAC TTTGTCGAAC TGCCCTCGCA GCTCTATGAA
CATTGGCTGA CGGTGCCGGA TATCCTGAAA ACCTATGCCG TGCATTACCA GACCGGTGAG
GCCATGCCAC AGGCCTTGCT CGATAAGGTT CTGGCAGCGC AAACCTTCAA TGCCGGGTTC
GATACGGTCG AATTCACCTC TTCGGCGCTG GTCGATATGG CGTTTCACAC CCGGGAGGAT
CGAGTGGCCG ATCCGATGGC GGTGCAGGCC GAGATTCTCC AAAATATCGG CATGCCGTCC
TCCATCGTCA TGCGCCATGC CACACCGCAT TTCCAACATG TGTTTTCCGG CGATGGCTAT
TCGGCTGGCT ATTATTCCTA CATGTGGTCG GAAGTGCTGG ATGCCGATGC CTTCGAGGCT
TTCGAGGAAA CCGGCAATGC CTTCGACCCT GATATGGCAG AGCGCCTGAA GGACAATATC
TACGCCATTG GCGGTGCAGT GGACCCGGAA GAAACCTACA AGGCTTTCCG TGGCCGGTTG
CCGAGCCCGG AAGCGATGTT GAAGAAGCGC GGGCTTGCGG CATAA
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| Protein sequence | MTFPDRNLGP NGAFATVTEW NGPHGLPNFT AIGDEDFVPA FDMALAEHDA DIDTIAHYPS
EPTFDNTIVA LEIAGDGLSR VSALFWNKAG ADTNQVIQAL EREIAPKMSR HYSKISMNAA
LFARVDALWE KRDSLGLTLE QTRVLERHWK GFVKAGAKLA KPEQERLAAI NERLASLGAN
FGQNVLGDET DWALPLTSDD ELAGIPDFLK DAMASAAQAR GKGESYAVTL SRSVIVPFLT
FSERRDLRET AFKAWVARGE NGGERDNRAI VTETLALRAE KAKLLGYKNF AALKLDNTMA
KTPEAVNGLL MQVWERAVAQ AAIEEQELAE LIAKDGKNHA VAPWDWRFYA EKLRSERFNF
SEAELKPYLQ LEKIIEACFA VAQKLFGITA VPLKDVKGYH PDVRVFEIRE ADGTVKALFL
GDYFARSSKR SGAWMSSFQS QHKLPLKNGA QGELPIIYNV CNFAKPAEGK PALLSLDDAR
TLFHEFGHAL HGMLSDVTYP SVSGTAVSRD FVELPSQLYE HWLTVPDILK TYAVHYQTGE
AMPQALLDKV LAAQTFNAGF DTVEFTSSAL VDMAFHTRED RVADPMAVQA EILQNIGMPS
SIVMRHATPH FQHVFSGDGY SAGYYSYMWS EVLDADAFEA FEETGNAFDP DMAERLKDNI
YAIGGAVDPE ETYKAFRGRL PSPEAMLKKR GLAA
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