Gene Avi_4149 details

Gene Information

• Locus tag: Avi_4149
• ID: 7386925
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Agrobacterium vitis S4
• Kingdom: Bacteria
• Replicon accession: NC_011989
• Strand: +
• Start bp: 3497951
• End bp: 3498460
• Gene Length: 510 bp
• Protein Length: 169 aa
• Translation table: 11
• GC content: 57%
• IMG OID: 643652843
• Product: hypothetical protein
• Protein accession: YP_002551016
• Protein GI: 222150059
• COG category: [S] Function unknown
• COG ID: [COG4103] Uncharacterized protein conserved in bacteria

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.640166
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCTGGAGC GCCTCAATAC TTTTTTCCAA AGCTTTATCG CTGGCGAACA GGACAATGAA 
TTCGACGGCA ACGACACGAG GGTGCTGATC GTCGCCCTGT GTTTCCAGGT GATGGAAGCT 
GACGGAACCA TTAGCGCCGC CGAACGGAAG AGCCTGAAAA AGAGCATCAA GGACCATTAC 
GATCTGGATC GCAGCAAAAT CGACGCCTTG CTGGAGGCTG GCCAGCAGGC GGAAAGCGAA 
GCGGTGGACT ATTACCGCTT CACCTCTGAA TTGAAGCGCC GTCTTGATGA AAACCAGAGG 
CTGGAACTGG TCAGCGTGCT CTGGGACATC GTGTATGCCG ATGGCATGCG CAACGAGATG 
GAAGATCACA TCCTCTGGCG GGTCGCCGAC CTGCTTGGCG TCTCGGACCG GGATCGGATT 
CTCGCCAGAC AAAAGGCGGC GGAGCGGGCC GGACAAAATA CGGATGGCCA GGCCGGAGAT 
GAAGCAGTCG CCGGAGATGC GGATGCTTGA 

 

Protein sequence

MLERLNTFFQ SFIAGEQDNE FDGNDTRVLI VALCFQVMEA DGTISAAERK SLKKSIKDHY 
DLDRSKIDAL LEAGQQAESE AVDYYRFTSE LKRRLDENQR LELVSVLWDI VYADGMRNEM 
EDHILWRVAD LLGVSDRDRI LARQKAAERA GQNTDGQAGD EAVAGDADA