| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_4144 |
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| Symbol | gcp |
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| ID | 7386920 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 3492042 |
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| End bp | 3493139 |
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| Gene Length | 1098 bp |
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| Protein Length | 365 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 643652838 |
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| Product | putative DNA-binding/iron metalloprotein/AP endonuclease |
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| Protein accession | YP_002551011 |
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| Protein GI | 222150054 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0533] Metal-dependent proteases with possible chaperone activity |
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| TIGRFAM ID | [TIGR00329] metallohydrolase, glycoprotease/Kae1 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAGGTC CTTTGAAGAT TCTCGGCATC GAAACCAGCT GCGATGAAAC CGCAGCCGCT
ATCGTTCTGC GCCATGATGA TGGGCGCGGC GAAATCGTGT CCGATGTGGT GTTGAGCCAG
CTGGACGAAC ACAGCGTCTA TGGCGGCGTC GTGCCGGAAA TCGCCGCCCG CGCCCATGTC
GAGGCGCTGG ATACGCTGGT GGAAGAGGCC CTGGCCAAGG CCGATACCCG GCTTTGCGAT
ATCGATGCCG TGGCGGCCAC CGCCGGTCCC GGCCTGATCG GCGGGTTGAT CGTCGGGTTG
ATGACCGGCA AGGCGATTGC CCGGGCGGCG GGAAAGCCGC TTTTTGCTAT CAACCATCTG
GAAGGCCATG CGCTGACGGC GCGGCTGACG GACAATGTTG CCTTTCCCTA TCTGATGCTG
CTGGTTTCAG GTGGTCATAC CCAATTGGTT CTGGTGCGCG GCGTCGGCGA TTACCAGCGC
TGGGGCACCA CCATCGACGA TGCGCTCGGA GAGGCGTTTG ACAAGACCGC CAAGCTGCTC
GGCCTTCCCT ATCCGGGTGG CCCGGCGGTG GAGCGCGCCG CCCTTCATGG CAACGAAAAA
CGCTTCAATT TTCCGCGACC GCTGGTGGGC GAGGCGCGGC TGGATTTTTC CTTTTCTGGA
TTGAAGACCG CGGTGCGGCA GGCGGCACAG GCGGCAGCGC CGGTTAGCCA AGCGGATATC
GCCGATATCT GCGCCTCTTT CCAGCGCGCC ATCGCCCGCA CCATGGACGA CCGGATCGGC
CGGGGGCTGG AGCGGTTCAA TACGGAATAT CCGGGCCTTG AGGCCAAGCC AGCCCTGGTG
GTGGCTGGCG GCGTCGCCGC CAATCAGGCG CTGCGTGCTG CCTTGCAGAC GCTTTGCGAC
CGGCATGGGT TTCGCTTTAT CGCGCCACCG CATCATCTTT GCACCGACAA TGCGGCAATG
ATCGCCTGGG CCGGGCTAGA GCGGCTGGCC CATGGCTTTC CGGCTGATGA CCTGTCGGTC
TCGCCACGCG CCCGCTGGCC GCTGGACGCC AATGCGGCGA CCCTGCTTGG CTCCGGCAAG
CGAGGCGCAA AAGCATGA
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| Protein sequence | MTGPLKILGI ETSCDETAAA IVLRHDDGRG EIVSDVVLSQ LDEHSVYGGV VPEIAARAHV
EALDTLVEEA LAKADTRLCD IDAVAATAGP GLIGGLIVGL MTGKAIARAA GKPLFAINHL
EGHALTARLT DNVAFPYLML LVSGGHTQLV LVRGVGDYQR WGTTIDDALG EAFDKTAKLL
GLPYPGGPAV ERAALHGNEK RFNFPRPLVG EARLDFSFSG LKTAVRQAAQ AAAPVSQADI
ADICASFQRA IARTMDDRIG RGLERFNTEY PGLEAKPALV VAGGVAANQA LRAALQTLCD
RHGFRFIAPP HHLCTDNAAM IAWAGLERLA HGFPADDLSV SPRARWPLDA NAATLLGSGK
RGAKA
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