| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_4143 |
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| Symbol | gpsA |
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| ID | 7386919 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 3491056 |
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| End bp | 3492045 |
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| Gene Length | 990 bp |
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| Protein Length | 329 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 643652837 |
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| Product | NAD(P)H-dependent glycerol-3-phosphate dehydrogenase |
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| Protein accession | YP_002551010 |
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| Protein GI | 222150053 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0240] Glycerol-3-phosphate dehydrogenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTGGAC AGCATCACAT TGCGGTCATC GGTGCCGGAG CCTTCGGCAC GGCGCTGGCG
GCTGTCATGG CGCTGGAAGG CCGGTCCAAA GTGACCTTGC TGGGCCGTGA TCCGTCCTTG
ATGGCCGATC TCAGGACCGA TGGCATGCAT GATGCGGCTC TGCCGGGTGT CGCCTTGCCT
TTCGGGTTGG AATTCGCCTT CGAGCCGGAT GTGCTGGCCG ATGCCGATAT CGTGTTGTTT
GCCATGCCCT CGCAGGCGCA GGCCGATGCC GCATCGACCT ATGGTCCCTA TCTTTCCGCC
GACGCTATGG TCGTGACCTG CGCCAAGGGC ATCGACCGGG CAAGCTCCCG GCTGCTGACC
GAGCTTTTGG AAGAAAAATT GCCGCATCAT CCCGTCGCGG TTCTGTCAGG ACCAGGCTTT
GCCATGGATA TCGCCCGAGG CCTGCCGACG GCGATGGCAC TGGCGGCTGA CAATCTTGAC
ATGGCCGAGG AACTCGCCCG CACGCTGTCC ACCCGGACAT TCCGGCTTTA TGCCGCCGAC
GACCGGATTG GTGTGCAATT GGGCGGAGCG TTGAAGAATG TGCTGGCGAT AGCCTGCGGC
ATTGTCGAGG GCCGGGGATT GGGCGAATCA GCCCGTGCGG CGTTGATTGC GCGTGGCCTT
GCGGAAATGT CGCGGCTGGT CGTCGCCATG GGTGGCAAGG CGGATACGGT GCGCGGCCTG
TCGGGCCTTG GCGATCTGGT GTTGACGGCC ACCAGCCATC AATCCCGCAA CCTGCGCTAT
GGTATTTCCC TTGCCAAGGG CGAGCAAAGC CAGCTTGGCA GCGGTGGTTT GGTCGAGGGT
GCCTTTGCGG CTGCCGTCGC GGCCCGCCTT GCTGAACACC ACGCTATCGC CATGCCGATT
ACCCAGGCCA TTGCCGCCAT CATCGATGGT GTGCTGGATA TCGACCGGGC GGTTGATGCG
CTGATGACCC GCCCCATTAC CACGGAATAA
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| Protein sequence | MSGQHHIAVI GAGAFGTALA AVMALEGRSK VTLLGRDPSL MADLRTDGMH DAALPGVALP
FGLEFAFEPD VLADADIVLF AMPSQAQADA ASTYGPYLSA DAMVVTCAKG IDRASSRLLT
ELLEEKLPHH PVAVLSGPGF AMDIARGLPT AMALAADNLD MAEELARTLS TRTFRLYAAD
DRIGVQLGGA LKNVLAIACG IVEGRGLGES ARAALIARGL AEMSRLVVAM GGKADTVRGL
SGLGDLVLTA TSHQSRNLRY GISLAKGEQS QLGSGGLVEG AFAAAVAARL AEHHAIAMPI
TQAIAAIIDG VLDIDRAVDA LMTRPITTE
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