Gene Avi_4141 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_4141 
Symbol 
ID7386917 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011989 
Strand
Start bp3490307 
End bp3490738 
Gene Length432 bp 
Protein Length143 aa 
Translation table11 
GC content60% 
IMG OID643652835 
Producthypothetical protein 
Protein accessionYP_002551008 
Protein GI222150051 
COG category[S] Function unknown 
COG ID[COG2947] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTTTCT GGCTTTACAA ATCCGAGCCT TTCAAGTGGT CCTGGGCCAT GCAGAAGGAT 
GCGGGCGAGG CGGGTACCGA ATGGACCGGG GTGCGCAACT ATCTGGCCCG CAACAATATG
CGGGCGATGC AGGTAGGCGA CAAAGGCCTG TTCTACCACT CCAACGAGGG GTTGGAAGTG
GTCGGCATCA CAGAGGTTTG CGCGCTCTCC CATCCTGATT CGACCGCTGA GGGCGATGCT
CGTTGGGACT GCGTCGATAT CCGCGCCGTG CGGGATATGC CAAAACCGGT GACCCTGAAG
GACGTCAAGG CCAATCCGAA ACTGGCGCAG ATGGCGCTGG TGACGTCGAT GCGGCTTTCG
GTGCAGCCGG TGACCGAGGA GGAATATTTC GAGATCTGCC GGATGGGCGG GCTTGAAAAC
CCGCCGGTGT GA
 
Protein sequence
MAFWLYKSEP FKWSWAMQKD AGEAGTEWTG VRNYLARNNM RAMQVGDKGL FYHSNEGLEV 
VGITEVCALS HPDSTAEGDA RWDCVDIRAV RDMPKPVTLK DVKANPKLAQ MALVTSMRLS
VQPVTEEEYF EICRMGGLEN PPV