Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_4139 |
Symbol | |
ID | 7386916 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011989 |
Strand | - |
Start bp | 3489651 |
End bp | 3490310 |
Gene Length | 660 bp |
Protein Length | 219 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 643652834 |
Product | hypothetical protein |
Protein accession | YP_002551007 |
Protein GI | 222150050 |
COG category | [R] General function prediction only |
COG ID | [COG3897] Predicted methyltransferase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGAGCGTTT CCCCTGTGAA GATCGATCCC CGGCGCTTCA TTCTCGACAA TACCGATCTG ATCGCTCCGC CGCATGTGCC GGAAATCCGG CTGCATCTGG CCAGTGAAGT TCATGATCTC TGGCTGAAAA CCGAGGACGA TCTGGCGGAA ATCGGCCTGC CGCCGCCGTT CTGGGCCTTT GCCTGGGCCG GCGGCCAGGG CTTGGCGCGT CATATCCTCG ACAATCCGCA GCTTGTGGCG GGCAAGCGTG TGGTGGATTT CGCCAGTGGT TCCGGTCTCG TTGCCATCGC CGCCGCCAAG GCTGGTGCTG TTTCGGTGCT GTGCGTGGAC ATCGATCCTT TCGTACAGGC GGCAATTGCC CTCAATGCGG CTGAAAACGG GGTGGAACTC GGCTTTTGGG GCAAGGATCT GATCGGTCAG ACACTGGATG CCGACCTGCT CCTGGCTGGC GACGTTTTTT ACGACAAGAG CTTTGCCGAC CGACTGGTAC CCTGGTTTTC AACGCTGTGC GGCGAGGGTA CCGATATTCT GATCGGTGAT CCCGGGCGAA GCTATTGTCC GATTGATCGG ATGCGGGCCT TGGCGACCTA TCAGGTCCCG GTCACGCGGA TGCTTGAAGA CAGCGAGGTG AAGAAAACCA CCGTCTGGAA GTTTTGCTGA
|
Protein sequence | MSVSPVKIDP RRFILDNTDL IAPPHVPEIR LHLASEVHDL WLKTEDDLAE IGLPPPFWAF AWAGGQGLAR HILDNPQLVA GKRVVDFASG SGLVAIAAAK AGAVSVLCVD IDPFVQAAIA LNAAENGVEL GFWGKDLIGQ TLDADLLLAG DVFYDKSFAD RLVPWFSTLC GEGTDILIGD PGRSYCPIDR MRALATYQVP VTRMLEDSEV KKTTVWKFC
|
| |