Gene Avi_4139 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_4139 
Symbol 
ID7386916 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011989 
Strand
Start bp3489651 
End bp3490310 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content59% 
IMG OID643652834 
Producthypothetical protein 
Protein accessionYP_002551007 
Protein GI222150050 
COG category[R] General function prediction only 
COG ID[COG3897] Predicted methyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGCGTTT CCCCTGTGAA GATCGATCCC CGGCGCTTCA TTCTCGACAA TACCGATCTG 
ATCGCTCCGC CGCATGTGCC GGAAATCCGG CTGCATCTGG CCAGTGAAGT TCATGATCTC
TGGCTGAAAA CCGAGGACGA TCTGGCGGAA ATCGGCCTGC CGCCGCCGTT CTGGGCCTTT
GCCTGGGCCG GCGGCCAGGG CTTGGCGCGT CATATCCTCG ACAATCCGCA GCTTGTGGCG
GGCAAGCGTG TGGTGGATTT CGCCAGTGGT TCCGGTCTCG TTGCCATCGC CGCCGCCAAG
GCTGGTGCTG TTTCGGTGCT GTGCGTGGAC ATCGATCCTT TCGTACAGGC GGCAATTGCC
CTCAATGCGG CTGAAAACGG GGTGGAACTC GGCTTTTGGG GCAAGGATCT GATCGGTCAG
ACACTGGATG CCGACCTGCT CCTGGCTGGC GACGTTTTTT ACGACAAGAG CTTTGCCGAC
CGACTGGTAC CCTGGTTTTC AACGCTGTGC GGCGAGGGTA CCGATATTCT GATCGGTGAT
CCCGGGCGAA GCTATTGTCC GATTGATCGG ATGCGGGCCT TGGCGACCTA TCAGGTCCCG
GTCACGCGGA TGCTTGAAGA CAGCGAGGTG AAGAAAACCA CCGTCTGGAA GTTTTGCTGA
 
Protein sequence
MSVSPVKIDP RRFILDNTDL IAPPHVPEIR LHLASEVHDL WLKTEDDLAE IGLPPPFWAF 
AWAGGQGLAR HILDNPQLVA GKRVVDFASG SGLVAIAAAK AGAVSVLCVD IDPFVQAAIA
LNAAENGVEL GFWGKDLIGQ TLDADLLLAG DVFYDKSFAD RLVPWFSTLC GEGTDILIGD
PGRSYCPIDR MRALATYQVP VTRMLEDSEV KKTTVWKFC