| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_4134 |
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| Symbol | sdhB |
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| ID | 7388672 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 3485539 |
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| End bp | 3486318 |
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| Gene Length | 780 bp |
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| Protein Length | 259 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 643652829 |
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| Product | succinate dehydrogenase iron-sulfur subunit |
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| Protein accession | YP_002551002 |
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| Protein GI | 222150045 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0479] Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit |
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| TIGRFAM ID | [TIGR00384] succinate dehydrogenase and fumarate reductase iron-sulfur protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTTGAAC TGACGCTTCC CAAGAATTCT CAGATCAAGC CGGGCAAGGT CTGGCCAAAG
CCTTCAGGTG CCAAGAACCT GCGGGAATAC CAGATCTATC GCTGGAGCCC CGATGACGAC
AAAAATCCAA GCCTCGACAC CTATTATGTC GATATGGACG ATTGCGGTCC GATGGTTCTC
GACGGTCTTC TCTATATCAA GAACAAGATC GATCCGACGC TGACGTTCCG CCGGTCCTGT
CGTGAGGGCA TTTGCGGCTC CTGCGCGATG AATATCGATG GCACCAACAC GCTGGCCTGC
ACCAAGGGTA CCGACGAGGT GAAGGGGACC GTGAAGGTCT ATCCTCTGCC GCATATGCCT
GTGGTCAAGG ATCTGGTTCC CGACCTGACA AACTTCTATG CCCAGCACCG CTCTATCGAG
CCCTGGCTGA AAACGGTGTC TCCGACGCCG GTTAAGGAAT GGAAGCAGAG CCATGACGAC
CGGCAGAAGC TGGACGGCCT TTATGAGTGC ATTCTCTGCG CTTGCTGCTC GACGTCTTGC
CCGAGCTATT GGTGGAATGG CGACCGCTAT CTCGGCCCAG CCGTGCTGCT GCAAGCCTAT
CGCTGGTTGA TCGACAGCCG TGACGAGGCC AAGGGCGAGC GACTGGATAA TCTGGAAGAT
CCCTTCCGGC TCTATCGCTG CCATACGATC ATGAATTGCG CGCAAGTCTG TCCAAAGGGC
CTCAATCCGG CCAAGGCGAT TGCCGAAATC AAGAAAATGA TGGTCGAGCG CCGCGTTTGA
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| Protein sequence | MVELTLPKNS QIKPGKVWPK PSGAKNLREY QIYRWSPDDD KNPSLDTYYV DMDDCGPMVL
DGLLYIKNKI DPTLTFRRSC REGICGSCAM NIDGTNTLAC TKGTDEVKGT VKVYPLPHMP
VVKDLVPDLT NFYAQHRSIE PWLKTVSPTP VKEWKQSHDD RQKLDGLYEC ILCACCSTSC
PSYWWNGDRY LGPAVLLQAY RWLIDSRDEA KGERLDNLED PFRLYRCHTI MNCAQVCPKG
LNPAKAIAEI KKMMVERRV
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