| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_4129 |
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| Symbol | mdh |
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| ID | 7388918 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 3482247 |
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| End bp | 3483209 |
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| Gene Length | 963 bp |
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| Protein Length | 320 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 643652826 |
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| Product | malate dehydrogenase |
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| Protein accession | YP_002550999 |
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| Protein GI | 222150042 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0039] Malate/lactate dehydrogenases |
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| TIGRFAM ID | [TIGR01763] malate dehydrogenase, NAD-dependent |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGCGCA ACAAGATCGC ACTTATTGGT TCTGGAATGA TCGGTGGTAC GCTGGCCCAT
CTGGCCGGCT TGAAGGAACT GGGCGACATC GTCCTGTTCG ATATTGCCGA TGGCGTACCG
CAGGGTAAGG GTCTCGACAT TGCGCAGTCG TCGCCCGTTG AAGGCTTCAA TGCCAAGCTG
ACCGGTTCGA GCGACTACGC CGCCATCGAA GGTGCGGATG TCTGCATCGT CACCGCTGGT
GTGCCGCGCA AGCCCGGCAT GAGCCGCGAC GACCTGCTCG GCATCAACCT CAAGGTCATG
GAACAGGTTG GCGCTGGCAT CAAGAAATAT GCCCCCAACG CCTTCGTGAT CTGCATCACC
AATCCGCTCG ATGCCATGGT CTGGGCGTTG CAGAAGTTCT CCGGCCTTCC GGCCAACAAG
GTTGTCGGCA TGGCCGGCGT TCTCGACAGC TCGCGTTTCC GCCTGTTCCT GGCTGAGGAA
TTCAACGTTT CGGTTCAGGA TGTCACGGCT TTCGTGCTTG GCGGCCATGG CGACACGATG
GTGCCGCTGG CTCGTTACTC CACGGTTGGC GGTATCCCGC TGACCGATCT GGTCAAGATG
GGCTGGGTCA CCGCTGAACG CCTGGAAGAG ATCATTCAGC GCACCCGTGA TGGCGGCGCC
GAAATCGTCG GCCTGTTGAA GACCGGTTCG GCCTTCTATG CGCCAGCCGC TTCGGCGATC
GAAATGGCTG AATCCTACCT CAAGGACAAG AAGCGCGTTC TGCCTTGCGC TGCACACCTG
ACCGGTCAGT ACGGCGTCAA GGACATGTAT GTTGGCGTAC CCACGGTGAT CGGTGCTGGC
GGCGTCGAAC GCGTCATCGA GATCGAACTG AACAAGGACG AGGAAGCGGC TTTCCAGAAG
TCGGTCGGCG CTGTCGCCGG TCTCTGCGAA GCCTGCATCA ATATTGCTCC GGCTCTTAAG
TAA
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| Protein sequence | MARNKIALIG SGMIGGTLAH LAGLKELGDI VLFDIADGVP QGKGLDIAQS SPVEGFNAKL
TGSSDYAAIE GADVCIVTAG VPRKPGMSRD DLLGINLKVM EQVGAGIKKY APNAFVICIT
NPLDAMVWAL QKFSGLPANK VVGMAGVLDS SRFRLFLAEE FNVSVQDVTA FVLGGHGDTM
VPLARYSTVG GIPLTDLVKM GWVTAERLEE IIQRTRDGGA EIVGLLKTGS AFYAPAASAI
EMAESYLKDK KRVLPCAAHL TGQYGVKDMY VGVPTVIGAG GVERVIEIEL NKDEEAAFQK
SVGAVAGLCE ACINIAPALK
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