Gene Avi_4127 details

Gene Information

• Locus tag: Avi_4127
• Symbol: sucC
• ID: 7388917
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Agrobacterium vitis S4
• Kingdom: Bacteria
• Replicon accession: NC_011989
• Strand: -
• Start bp: 3480927
• End bp: 3482123
• Gene Length: 1197 bp
• Protein Length: 398 aa
• Translation table: 11
• GC content: 56%
• IMG OID: 643652825
• Product: succinyl-CoA synthetase subunit beta
• Protein accession: YP_002550998
• Protein GI: 222150041
• COG category: [C] Energy production and conversion
• COG ID: [COG0045] Succinyl-CoA synthetase, beta subunit
• TIGRFAM ID: [TIGR01016] succinyl-CoA synthetase, beta subunit

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAATATTC ATGAATATCA GGCCAAGGCT CTGCTGAAGA GCTTTGGCGC ACCGGTTGCC 
GAAGGTGTGG CAATCTTTTC CGCCGATGAA GCCGAGGCGG CCGCAAAGCA GCTTCCTGGC 
CCGCTTTATG TCGTCAAGAG CCAGATCCAC GCTGGTGGTC GCGGCAAGGG CAAGTTTAAG 
GAACTCGGCC CGGATGCCAA GGGCGGCGTT CGCCTGGCGT TCTCGATCGA TGAAGTGAAG 
TCGCATGTTG CTGAAATGCT CGGCAACACG CTGGTGACCA ACCAGACCGG CCCCGCTGGC 
AAGCAGGTGA ACCGCCTGTA TATTGAAGAC GGTGCTGATA TCGAGCGCGA ACTTTATCTG 
TCGCTGCTCG TCGACCGCGC TGTTGGTCAG GTTGCTTTCG TGGTCTCCAC CGAAGGCGGC 
ATGGACATTG AAACGGTTGC TCACGACACC CCGGAAAAGA TCATCAGCGT TGCGATTGAT 
CCAGAAGCTG GTGTAACGGC TGCCAATCTC GAAGCCCTGA CTGCGGCTTT GCTGCTCGAA 
GGCGAAGCCA AGGCTGACGC TGAAAAGCTG TTCCCAATCC TGTACAAAGC CTTTGTCGAA 
AAGGACATGG CGCTTCTGGA AGTGAACCCG CTGATCGTCA TGAAGAACGG TCGTATGCGC 
GTTCTCGATG CCAAGATGTC CTTCGACGGC AACGCCCTGT TCCGCCACGA AGATGTGGTG 
GCTCTGCGCG ACAAGACCGA AGAAGACGCC AAGGAAATTG AAGCCTCCAA GTACGATCTG 
GCTTATGTCG CGCTCGATGG CAATATCGGC TGCATGGTCA ATGGCGCAGG TCTTGCCATG 
GCAACCATGG ACATCATCAA GCTCTACGGT GCTGAGCCGG CAAACTTCCT CGACGTTGGT 
GGCGGCGCGA CCAAGGAAAA GGTAACGGCA GCCTTCAAGA TCATCACTGC CGATCCGGCT 
GTGAAGGGCA TTCTGGTCAA CATCTTCGGC GGTATCATGA AGTGTGACGT GATTGCCGAA 
GGCGTTCTGG CTGCCGTCAA GGACGTCGGC CTCACCGTTC CACTCGTTGT TCGCCTCGAA 
GGCACCAATG TCGAGCTGGG CAAGAAAATC ATCAACGAAT CCGGTCTCAA CGTCATTTCG 
GCGGATGATC TGGACGATGC TGCGCAGAAG ATCGTCGCAG CCGTGAAGGC AGCGTGA 

 

Protein sequence

MNIHEYQAKA LLKSFGAPVA EGVAIFSADE AEAAAKQLPG PLYVVKSQIH AGGRGKGKFK 
ELGPDAKGGV RLAFSIDEVK SHVAEMLGNT LVTNQTGPAG KQVNRLYIED GADIERELYL 
SLLVDRAVGQ VAFVVSTEGG MDIETVAHDT PEKIISVAID PEAGVTAANL EALTAALLLE 
GEAKADAEKL FPILYKAFVE KDMALLEVNP LIVMKNGRMR VLDAKMSFDG NALFRHEDVV 
ALRDKTEEDA KEIEASKYDL AYVALDGNIG CMVNGAGLAM ATMDIIKLYG AEPANFLDVG 
GGATKEKVTA AFKIITADPA VKGILVNIFG GIMKCDVIAE GVLAAVKDVG LTVPLVVRLE 
GTNVELGKKI INESGLNVIS ADDLDDAAQK IVAAVKAA