| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_4122 |
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| Symbol | sucA |
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| ID | 7388914 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 3476471 |
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| End bp | 3479467 |
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| Gene Length | 2997 bp |
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| Protein Length | 998 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 643652822 |
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| Product | 2-oxoglutarate dehydrogenase E1 component |
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| Protein accession | YP_002550995 |
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| Protein GI | 222150038 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0567] 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes |
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| TIGRFAM ID | [TIGR00239] 2-oxoglutarate dehydrogenase, E1 component |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAAGGC AAGAAGCCAA CGAGCAGTTT CAGATCACCT CGTTCCTGGA CGGATCGAAT
GCGATCTATA TCGAGCAGCT TTATGCGCGT TACGAAGACG ATCCGAATTC GGTATCGCCT
GAGTGGCAAT CCTTCTTCAA GGCGCTGGGC GATAATCCAA GCGATGTGAA AAAGGCGGCC
AAGGGAGCCT CCTGGCAGCG GAGCAATTGG CCGCTGACGC CTCGTACCGA TCTGGTATCG
GCGCTGGATG GCAATTGGGG TCTGGTCGAG AAGGCCATTG AAACCAAGGT CAAGGGCAAG
GCAGAAGCCG CAGCCGCAAC CACGGGTAAA CCGGTTTCTG AAACCGATGT GTTGCAGGCG
ACCCGTGATA GCGTGCGCGC CATCATGATG ATCCGCGCAT ATCGCATGCG CGGTCATTTG
CACGCCAAGC TCGACCCGCT GGGCATTGCT ACGGCGGTTG AAGATTACAA CGAGCTGTCA
CCATTGTCTT ACGGCTTTAC CGAAGCCGAT TTTGACCGCA AGATCTTCAT CGATAACGTT
CTGGGGCTGG AATATGCCAC CGTGCGTGAG ATGATCGAAA TTCTTGAGCG CACCTATTGC
TCGACGCTCG GTTTCGAATT CATGCACATC TCCAATCCGG AAGAAAAATC CTGGATTCAG
GAGCGCATCG AAGGCCCGGA TAAAGGCGTC GATTTCACCG TCGAGGGCAA GAAGGCCATT
CTGCAAAAGC TGGTTGAGGC CGAAGGCTTT GAGCAGTTTA TCGATGTGAA GTACAAGGGC
ACCAAGCGCT TTGGTTTGGA TGGCGGCGAG TCGCTGATCC CGGCGCTGGA GCAGATCATC
AAGCGCGGTG GTCAGGAGGG TCTTGAAGAG GTCGTGCTTG GCATGGCGCA TCGTGGCCGT
CTGAACGTGC TGACCAATGT GATGCACAAG CCGCATCGCG CCGTGTTCCA CGAGTTCAAG
GGCGGTTCGT TCAAGCCTGA TGAAGTTGAA GGCTCCGGCG ACGTGAAGTA CCATCTTGGT
GCCTCGTCTG ACCGCGAATT CGATGGCAAC AAGGTTCACT TGTCGCTGAC GGCCAATCCG
TCGCATCTGG AAATCGTTAA CCCTGTGGTG ATGGGTAAGG CCCGCGCCAA GCAGGACCAG
CTGGCCAAAG TCTGGGAAGG CGACGTGATT CCGCTGAAGG AACGCGCCAA GGTTCTGCCG
CTGCTGCTGC ATGGTGACGC TGCCTTTGCG GGTCAGGGCG TTGTAGCTGA AATTCTCGGC
CTATCCGGTC TGCGCGGTCA CCGCGTGGCT GGCACGATGC ATGTGATCAT CAACAACCAG
ATCGGCTTTA CCACCAATCC GGGCTTCTCG CGCTCCTCGC CTTATCCATC GGATGTGGCC
AAGATGATCG AAGCGCCGAT CTTCCACGTC AATGGGGATG ATCCGGAAGC TGTAGTTTAT
GCCGCCAAGG TGGCGACTGA ATTCCGCATG AAGTTCCACA AGCCTGTGGT TGTGGACATG
TTCTGCTACC GTCGATTTGG CCATAATGAA GGTGATGAGC CTTCGTTCAC CCAGCCGAAG
ATGTACAAGG AAATCCGCGC CCATAAGACC GTTGTTCAGG TCTATGGCGA TCGCTTGATT
GCTGAAGGCG TGATTACCGA AGGCGATCTC GAAAAGATGA AGGCCGATTG GCGCGCCAAT
CTCGAGCAGG AGTTCGAGGC TGGCCAGTCC TACAAGCCTA ACAAGGCTGA CTGGCTGGAT
GGCGTCTGGT CCGGTCTTCG CGCTGCCGAC AATGCCGATG AGCAGCGTCG CGGCAAGACA
GCCATGCCGA TGAAGTCCCT GAAGGAGATC GGCCGCAAGC TGTCGACCAT TCCTGATGGC
TTCAAAGCGC ATCGCACCAT CCAGCGCTTC ATGGAAAACC GCGCCCAGAT GATCGAGACC
GGCGAGGGTA TCGATTGGGC GATGGCCGAG GCACTGGCTT TCGGTTCGCT GGTCGTTGAA
GGCCACAAGA TCCGCCTGTC CGGTCAGGAT TGCGAGCGCG GCACATTCAG CCAGCGTCAT
TCGGTGCTCT ACGATCAGGA AAGCGAAGAT CGCTACATTC CGCTGGCCAA TCTGGCCCCC
AATCAGGCTC GCTACGAAGT CATCAATTCG ATGCTGTCGG AAGAGGCCGT GCTTGGCTTC
GAATACGGCT ATTCGCTGGC ACGTCCGAAT GCGTTGACCC TGTGGGAAGC CCAGTTCGGT
GACTTCGCCA ACGGCGCCCA GGTGGTGTTC GACCAGTTCA TCTCGTCGGG TGAACGCAAG
TGGCTTCGCA TGTCCGGCCT CGTCTGCCTT CTGCCGCATG GCTATGAAGG TCAGGGACCG
GAACACTCTT CGGCTCGTCT GGAGCGCTGG CTGCAAATGT GCGCCGAAGA CAACATGCAG
GTTGCCAACG TCACGACGCC GAGCAATTAC TACCATATCC TGCGCCGTCA GGTGAAACGC
GACTTCCGCA AGCCGCTGAT CCTGATGACG CCGAAGTCGC TGCTGCGCCA CAAGCGGGCC
CAGTCTACCC TGGCGGAAAT GGCAGGCGAA AGCTCTTTCC ATCGCCTGCT GTGGGATGAT
GCCGAGATCA TCAAGGACGG TCCGATCAAG CTCCAGAAGG ATGCCAAGAT CCGCCGCGTG
GTGATGTGCA GTGGCAAAGT TTATTATGAC CTGCTGGAAG AGCGCGAAAA GCGTGGCATC
GACGATGTCT ACCTGCTGCG TATCGAACAG CTCTATCCGT TCCCGGCCAA GGCGCTGATC
AATGAGCTCA GCCGCTTCCG CAATGCGGAA ATGGTCTGGT GCCAGGAAGA GCCGAAGAAC
ATGGGGGCCT GGTCCTTCAT CGATCCGTAC CTGGAATGGG TGCTGGCGCA TATCGACGCC
AAGTATCAGC GCGTGCGCTA TACCGGCCGC CCGGCTGCCG CCTCTCCAGC GACGGGTCTG
ATGTCCAAGC ATCTCGCCCA ACTGCAAGCC TTCCTGGAGG ACGCACTCGG CGGCTGA
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| Protein sequence | MARQEANEQF QITSFLDGSN AIYIEQLYAR YEDDPNSVSP EWQSFFKALG DNPSDVKKAA
KGASWQRSNW PLTPRTDLVS ALDGNWGLVE KAIETKVKGK AEAAAATTGK PVSETDVLQA
TRDSVRAIMM IRAYRMRGHL HAKLDPLGIA TAVEDYNELS PLSYGFTEAD FDRKIFIDNV
LGLEYATVRE MIEILERTYC STLGFEFMHI SNPEEKSWIQ ERIEGPDKGV DFTVEGKKAI
LQKLVEAEGF EQFIDVKYKG TKRFGLDGGE SLIPALEQII KRGGQEGLEE VVLGMAHRGR
LNVLTNVMHK PHRAVFHEFK GGSFKPDEVE GSGDVKYHLG ASSDREFDGN KVHLSLTANP
SHLEIVNPVV MGKARAKQDQ LAKVWEGDVI PLKERAKVLP LLLHGDAAFA GQGVVAEILG
LSGLRGHRVA GTMHVIINNQ IGFTTNPGFS RSSPYPSDVA KMIEAPIFHV NGDDPEAVVY
AAKVATEFRM KFHKPVVVDM FCYRRFGHNE GDEPSFTQPK MYKEIRAHKT VVQVYGDRLI
AEGVITEGDL EKMKADWRAN LEQEFEAGQS YKPNKADWLD GVWSGLRAAD NADEQRRGKT
AMPMKSLKEI GRKLSTIPDG FKAHRTIQRF MENRAQMIET GEGIDWAMAE ALAFGSLVVE
GHKIRLSGQD CERGTFSQRH SVLYDQESED RYIPLANLAP NQARYEVINS MLSEEAVLGF
EYGYSLARPN ALTLWEAQFG DFANGAQVVF DQFISSGERK WLRMSGLVCL LPHGYEGQGP
EHSSARLERW LQMCAEDNMQ VANVTTPSNY YHILRRQVKR DFRKPLILMT PKSLLRHKRA
QSTLAEMAGE SSFHRLLWDD AEIIKDGPIK LQKDAKIRRV VMCSGKVYYD LLEEREKRGI
DDVYLLRIEQ LYPFPAKALI NELSRFRNAE MVWCQEEPKN MGAWSFIDPY LEWVLAHIDA
KYQRVRYTGR PAAASPATGL MSKHLAQLQA FLEDALGG
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